Protein

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Genbank accession
XOD42153.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDVEHCVVIPETYEMVTDSNGEFTMDLEAATSAYRVTAVGGDDEYEDDPCSQYTFTFYVPVSDDPIYVQELILMPPPNNLPWDEEAMNKISQAVVDARNARDDAEESAVHAEAQVGLAAEQVELAKYQVDLAKAEVAKASDQVDLAKAEVTKAADQVGLAKEEVTKAADQVGLAKEEVTKAADQVGLAKEEVTKAADQADRAKAEADRSSTQATAAAASAAQAKNEADRSKTEADRARELADGVAEKVEGGSLPPLVGMNETFTYEGTDPYMWESSGPIWRSSEDGVLFVAKTDGSNSRAFLRKDAEFPAGHWIVYLRIRTQNGLPGQNRCAQIRLMEEDNKECSLYFNLGTDNVPTPGVITMQYGYEGASDRTVASMFSPVNTELWMDLAIKYDAVNRHVELFRRLPNSTWEKGEGRLMVDALKPVAIEVSSFPVSPKDWWLHLDYISVCKPNLICYGDSIAAGQNEYGVTRGTEDYHSHRNWAGTWFAKAPLYATNRNNLVLVQGVEGRRTWQYLSHLSEISGSGVKVVFLHASTNDVYEPSMTQSKRTSDTQAIVDQLHAVGAQVVLFNSMQGTKAYNDASTGAVKLRDYTDTWWSTELPKVTGLAQTLDIARLLAKDGYMDPVLAADDGLHLTDAAAQKIAAKLGQFFSNSSDTNGFAPLDSPTFTGIPTVPTQTPLLPFGKTIANTEYVVTFLQDWTSRYGYGELSMASHTGAQLSGSGVRSGYYHVPAGSGNPLPGDLSSALAFVDHKSYDTNKGWQLWNPAYSGRLFIRTTNASGVWQTPVELATFTWLDANNVTKPRTLKFMELPVFNPTGSPTLSGFVPIQDSADGGWRNLSATPTGVALLGAASAGGALNYIGGMPIANQTLPDNNIDNAASNGFQRVPNGTSGLPLNIGDINGHSAITAVFDASIKYQLLFPRTTGVESYSNSVFYRARLDNGWESWVRLLASNQLEGNVTNDLLTSAVFQSNGNNSLNVGRSVRLANGTQIVSATVRLTFASEGILNYMYTYPMGFIEPPAVIVQPIEGPGADINGMPISAVMGPFTYNVANGNVLMQCFRVVGYTDTAFASNSFINCSVVAIGRWK
Physico‐chemical
properties
protein length:1120 AA
molecular weight: 121520,30440 Da
isoelectric point:4,85936
aromaticity:0,09107
hydropathy:-0,26536

Domains

Domains [InterPro]
DC_0617
ATT
1–66
DC_0617 DC_2023 DC_0711
Coil
Unmapped
118–145
Coil Coil Coil Coil IPR036514
IPR051532
Unmapped
257–682
IPR051532
SSF52266
STR
483–681
SSF52266
cd00229
ENZ
486–682
cd00229
IPR013830
ENZ
488–673
IPR013830
XOD42153.1
1 1120
Architecture
ATT
ATT
STR
ATT 1-66 | ATT 95-425 | STR 434-1119 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD42153.1
1 1120
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,9961
Central domain 287 531 246 0,5873
C-terminal 532 1120 588 0,7365
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-531
C-terminal
532-1120

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage BWKH3_L8_1
[NCBI] 		3390386 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD42153.1 [NCBI]
Genbank nucleotide accession
PQ287645.1 [NCBI]
CDS location
range 36746 -> 40108
strand +
CDS
ATGACTACCAAGGTGATATTCACCTTCCATAGCCCGGACGGCAGCCCACAGGCGAACGAAAAGTTCACCGTGCGTCTCACTCGTCCGGGCATGAGCGACGTAGAGCACTGCGTCGTTATCCCCGAAACCTATGAGATGGTGACTGACTCCAACGGCGAGTTCACCATGGACCTGGAAGCGGCTACCTCCGCCTACCGAGTCACTGCTGTAGGCGGTGATGACGAGTACGAGGATGACCCCTGCTCGCAGTACACCTTCACCTTCTACGTACCTGTATCGGATGACCCGATCTACGTACAAGAACTGATCCTGATGCCTCCTCCCAACAACTTGCCATGGGACGAGGAAGCCATGAACAAGATCTCCCAAGCAGTGGTCGATGCTCGCAATGCACGAGATGATGCCGAAGAGTCTGCTGTCCATGCAGAAGCTCAGGTAGGTCTGGCTGCCGAGCAAGTGGAACTGGCGAAGTATCAAGTGGATCTTGCTAAGGCGGAAGTCGCCAAGGCATCTGATCAAGTAGATCTCGCCAAAGCCGAGGTAACCAAGGCAGCTGATCAGGTTGGTTTGGCCAAAGAAGAAGTTACTAAGGCAGCTGATCAGGTTGGTTTGGCCAAAGAAGAAGTTACTAAGGCAGCTGATCAGGTTGGTTTGGCCAAAGAAGAAGTTACTAAGGCAGCTGATCAGGCTGACCGCGCCAAGGCAGAAGCTGATCGTTCCTCCACTCAAGCTACTGCTGCGGCTGCCTCTGCTGCCCAAGCCAAGAACGAAGCTGATCGTTCTAAGACGGAAGCGGACCGTGCTCGGGAATTAGCGGATGGCGTCGCGGAGAAGGTAGAGGGTGGATCTCTCCCGCCTCTGGTGGGTATGAACGAAACCTTCACCTACGAGGGTACTGATCCCTACATGTGGGAATCCTCTGGTCCCATCTGGCGATCCTCTGAGGATGGCGTTCTCTTTGTGGCCAAAACTGATGGGAGCAATTCTCGGGCTTTCCTGCGTAAAGATGCTGAATTCCCCGCTGGTCATTGGATCGTCTACTTGCGTATCCGTACGCAGAACGGCCTGCCGGGCCAGAACCGGTGTGCTCAAATCCGTCTCATGGAAGAAGACAACAAAGAGTGCTCTCTCTACTTCAACCTCGGTACGGATAACGTTCCTACTCCGGGTGTGATCACCATGCAGTATGGCTATGAAGGTGCCAGTGACCGCACTGTAGCCAGCATGTTCTCTCCGGTGAACACTGAGCTTTGGATGGATCTGGCCATCAAGTACGATGCAGTCAACCGTCATGTTGAACTCTTCCGTCGCCTTCCCAATTCCACCTGGGAAAAAGGCGAAGGTCGTCTCATGGTGGATGCTCTCAAGCCTGTGGCTATCGAAGTATCCTCGTTCCCCGTTTCGCCAAAAGACTGGTGGCTGCACCTTGACTACATCTCGGTGTGTAAGCCGAACCTTATCTGCTACGGCGACAGCATCGCTGCTGGTCAGAACGAGTACGGTGTTACTCGTGGTACTGAGGACTACCACAGCCACCGCAACTGGGCTGGTACTTGGTTCGCCAAGGCTCCGTTGTACGCTACGAACCGGAACAACTTGGTTCTGGTACAGGGTGTGGAAGGCCGTCGTACCTGGCAATACCTGAGCCATCTGAGTGAGATCAGTGGTTCCGGCGTCAAGGTGGTCTTCCTGCATGCCAGCACGAATGACGTGTATGAACCCTCTATGACCCAGTCCAAGCGGACCTCGGATACCCAAGCCATCGTAGACCAGCTTCATGCTGTCGGTGCCCAGGTAGTCCTGTTCAACTCCATGCAGGGAACCAAGGCGTACAACGATGCCTCGACTGGTGCGGTCAAGCTTCGTGACTACACCGATACATGGTGGAGCACTGAGCTTCCCAAGGTCACTGGTTTGGCTCAGACTCTGGACATCGCACGCCTTCTCGCCAAGGACGGGTATATGGACCCCGTCCTTGCTGCTGATGATGGCTTGCACCTGACGGATGCCGCTGCTCAGAAGATCGCTGCCAAGTTGGGTCAGTTCTTCTCCAACTCCAGTGATACCAATGGTTTCGCTCCGTTGGATAGCCCTACCTTCACTGGCATTCCGACCGTTCCGACGCAGACTCCACTCCTGCCGTTCGGCAAGACCATTGCCAACACCGAGTACGTGGTCACTTTCCTCCAGGATTGGACCAGCCGGTATGGCTATGGCGAACTGTCTATGGCTAGCCATACTGGTGCTCAGCTGTCCGGTTCCGGTGTCCGCAGCGGCTACTACCATGTACCTGCTGGTTCGGGTAACCCTCTCCCAGGCGATCTGAGCAGTGCTCTGGCTTTCGTAGACCACAAGTCTTATGACACCAACAAGGGATGGCAGCTGTGGAATCCGGCCTACTCTGGCCGACTGTTCATCCGTACGACGAATGCTTCTGGTGTCTGGCAGACTCCGGTAGAACTGGCCACCTTCACTTGGTTGGATGCGAACAACGTCACCAAGCCACGAACCCTGAAGTTCATGGAACTGCCGGTGTTCAATCCTACTGGTAGCCCCACTCTGTCTGGCTTCGTACCGATCCAGGACAGTGCGGATGGTGGCTGGCGTAACCTCTCTGCCACTCCTACTGGTGTGGCTCTGCTGGGTGCAGCTTCGGCAGGTGGAGCACTCAACTACATCGGTGGTATGCCCATCGCAAACCAGACTCTGCCCGACAACAACATCGATAACGCAGCCAGCAATGGCTTCCAAAGGGTTCCCAATGGAACCTCTGGGTTGCCTTTGAACATAGGCGACATCAATGGACACTCCGCCATTACTGCGGTGTTCGATGCCTCCATTAAGTACCAGCTGCTGTTCCCCCGCACTACTGGAGTAGAGTCTTACTCCAATTCTGTGTTCTATCGCGCACGGTTGGACAATGGATGGGAAAGTTGGGTTCGTCTTCTCGCCTCCAACCAGCTGGAAGGTAACGTAACCAACGACCTGCTCACCTCTGCTGTATTCCAGAGCAACGGTAACAACAGCCTCAACGTAGGTCGGTCTGTACGTTTGGCCAATGGTACTCAGATCGTCTCTGCTACCGTTCGGCTTACCTTTGCCTCTGAAGGTATTCTGAACTACATGTACACCTATCCTATGGGCTTTATCGAGCCGCCCGCTGTGATCGTGCAGCCCATTGAAGGTCCAGGAGCAGATATCAATGGAATGCCCATCTCTGCGGTTATGGGACCGTTCACGTATAACGTGGCGAATGGGAACGTTTTGATGCAGTGCTTCCGCGTTGTTGGTTATACTGACACTGCTTTTGCCAGCAACTCCTTCATCAACTGCTCTGTAGTAGCAATAGGACGGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
926473b82eac3b6a2e0be4a819e3392a08f930eec6c8e02bf1a6d4ce4e0af125
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6387
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50