Protein

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Genbank accession
UGV20510.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGADIDYATNAVTGQTQKTLPAVLRDAGFSPVSWDFSTGGTLTANDRDKVVYDPVSKTWYSYTGTLPVVVPASFNPVGNANWKPQTDPDLRNDLSSTDNATLGDAMVGVRQPFTDAVGRTQHDKNREVVSVLDFYLGTDPDYTNALNRALTASNGVLVPQGEYSTSLLSHPTCSLFGTGGGVLKQSNDSGNHLIFDKPAGGLLSTLSIVGNKATDFTQGQQVSFAGGQDVTIKGIDFKNAKGTGFSLIAYPSDEGPSGYIVSGIRGDYSGYATNKTAGCVLFESASNTIINDVIARNYPKFGAVELKTDAKCNVVSGVIGQSCQHVVYNGTGTTNAPSSNIISNVVANNAKYAAVVAGKGSGNLVTNVVADYSSSEATQAHGVTLQGNYNAADNILMVGCSGTNSLGQTQTATSIRFLDRASNNYASVFPMYSASGVVTLETGTTRNFVEVKHPGPKNSLLSSLSTITGVSSIDGTTTSNVVHAPAIGQYIGSMSGRFEWFTKYIDTSALPFVTADKFRLISDGATSLAIGGGTTSQIKLLTSDGTSRTISLVNGNLRLASDASAYIQIAPTAITPSSANTVAIGSASRALSGGFTQTAFTVTSDERAKTLPLELTDAMLDAWAEVNLVQYKYLDRVAEKGEDAARWHFGVVAQRAIEAFTRHGLDATKYGFLCYDKWEASPEIIDEESGEVLTKATAAGERYGIRYDEVLILEAALQRRKAAQLEKRIIALETLVATLTNS
Physico‐chemical
properties
protein length:778 AA
molecular weight: 81906,28590 Da
isoelectric point:5,37119
aromaticity:0,07712
hydropathy:-0,11967

Domains

Domains [InterPro]
DC_0018
ATT
1–235
DC_0018 cd10144
G3DSA:2.10.10.80
ATT
65–133
G3DSA:2.10.10.80 IPR011050 IPR030392
IPR012334
STR
175–640
IPR012334 IPR030392 Coil
IPR012334
STR
185–640
IPR012334 cd10144
IPR036388
RBD
641–767
IPR036388
UGV20510.1
1 778
Architecture
ATT
STR
RBD
ATT 1-235 | STR 236-640 | RBD 641-772 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGV20510.1
1 778
Domain Start End Length (AA) Confidence
N-terminal 1 177 177 0,9943
Central domain 178 533 357 0,9844
C-terminal 534 778 244 0,9452
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-177
Central
178-533
C-terminal
534-778

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia virus fEg-Eco19
[NCBI] 		2900297 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGV20510.1 [NCBI]
Genbank nucleotide accession
OL539727.1 [NCBI]
CDS location
range 28889 -> 31225
strand +
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAGACCGCCAAGAAACACCAGATTTTCGAAGCCGAGGTTATCACCGGCAAATCCGGCGGTGTTGCAGGTGGCGCCGATATTGATTACGCGACAAATGCCGTTACAGGGCAGACCCAAAAGACGTTACCAGCCGTGTTGCGTGACGCTGGTTTTTCTCCGGTGTCATGGGACTTTTCCACTGGTGGTACGTTAACCGCTAATGACCGCGACAAAGTGGTGTATGACCCTGTAAGCAAGACGTGGTACTCGTATACCGGGACTCTGCCGGTTGTTGTCCCCGCATCGTTTAACCCGGTTGGTAACGCTAACTGGAAGCCGCAGACTGACCCGGATTTGCGCAATGATTTATCCAGCACAGACAATGCGACATTAGGTGATGCCATGGTCGGCGTCCGACAACCATTTACCGACGCTGTCGGCAGGACGCAACACGATAAAAATAGAGAAGTAGTTTCCGTTCTGGACTTCTATTTAGGTACTGACCCTGATTACACAAACGCCCTTAACCGAGCGCTTACAGCTAGTAACGGGGTGCTTGTACCGCAAGGGGAGTATAGTACGTCGCTACTCTCCCACCCGACATGCTCTCTATTCGGAACAGGGGGTGGGGTTTTAAAACAATCAAACGATTCTGGAAACCACTTAATCTTTGATAAACCTGCAGGAGGGCTACTTAGCACCCTGAGTATTGTAGGAAATAAGGCAACGGACTTCACACAAGGTCAGCAGGTTTCCTTCGCCGGTGGGCAGGACGTTACTATTAAAGGTATTGATTTTAAAAATGCAAAGGGAACTGGATTTAGTTTAATAGCATACCCTAGTGATGAGGGTCCGTCTGGATACATTGTAAGCGGCATACGGGGCGACTACTCCGGGTATGCTACAAATAAAACAGCGGGGTGCGTGCTGTTTGAGTCCGCAAGTAATACTATAATCAACGATGTTATCGCCCGAAACTACCCCAAATTCGGGGCGGTTGAGTTGAAAACAGATGCTAAATGTAATGTTGTTAGTGGCGTCATTGGGCAAAGCTGTCAGCACGTTGTTTATAATGGCACCGGGACGACCAATGCCCCTAGCAGTAATATTATCAGTAATGTTGTTGCTAATAACGCTAAGTATGCCGCTGTGGTCGCCGGCAAGGGTTCAGGTAATCTGGTGACAAATGTTGTAGCTGATTACTCCTCCTCCGAGGCCACGCAAGCACACGGCGTTACATTACAAGGCAACTATAATGCCGCTGATAATATTCTAATGGTTGGGTGCAGCGGAACTAATAGTTTAGGGCAAACGCAAACCGCGACTTCTATTAGGTTTTTAGACAGAGCTAGTAATAACTACGCATCGGTTTTCCCTATGTATAGTGCTTCCGGGGTTGTTACACTAGAGACAGGGACTACCCGTAACTTTGTGGAAGTAAAGCACCCTGGACCCAAGAACAGTCTTCTTAGTTCACTATCTACTATAACCGGGGTCTCTAGCATTGATGGTACTACCACCAGTAACGTGGTACACGCCCCCGCTATAGGACAATACATAGGGTCCATGTCCGGTAGGTTTGAGTGGTTCACTAAGTATATAGATACTTCTGCATTGCCTTTTGTGACAGCTGATAAATTCAGACTAATTTCCGATGGGGCTACATCTTTGGCTATTGGCGGAGGTACGACCTCTCAGATAAAATTACTCACATCTGATGGTACTTCTCGAACTATTTCTCTGGTTAATGGTAATTTACGCTTAGCCTCTGACGCATCGGCGTATATTCAAATAGCCCCGACGGCTATTACACCATCCAGTGCAAACACCGTCGCTATCGGGTCGGCAAGTCGCGCTTTGTCCGGCGGATTCACTCAAACAGCGTTTACGGTTACGTCTGACGAGAGAGCCAAGACACTACCCCTGGAATTAACTGACGCTATGTTAGACGCTTGGGCTGAAGTTAATTTAGTTCAATATAAGTACCTGGATAGGGTTGCAGAGAAGGGGGAGGATGCAGCTAGGTGGCACTTTGGAGTAGTAGCCCAACGAGCAATTGAGGCGTTTACCCGGCACGGGTTGGACGCGACTAAGTACGGTTTCCTGTGCTACGATAAGTGGGAAGCGTCTCCGGAAATTATTGATGAGGAATCTGGGGAAGTATTAACAAAAGCTACGGCGGCAGGGGAGCGGTATGGTATTCGTTATGATGAGGTATTGATATTAGAGGCTGCGTTACAGCGACGTAAAGCAGCTCAGTTAGAGAAAAGGATTATAGCGCTTGAGACATTAGTGGCTACCCTGACAAACAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59025632d6e4b4cb22d792df0557b630c67b47bb7b8e18810cb1721918252abe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7879
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological and molecular characterization of fEg-Eco19, a lytic bacteriophage active against antibiotic resistant clinical Escherichia coli isolate Badawy,S., Baka,Z.A.M., Abou-Dobara,M.I., El-Sayed,A.K.A. and Skurnik,M. 2022-04-10 — GenBank