Protein

View in Explore
Genbank accession
XCO41087.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQEIKTVIQYPTGSTEFDIPFDYLSRKFVRVSLVADDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERIVDFSDGSVLRATDLNVSQLQSAHIAEEARDSALLAMPQDDAGNLDARNRRIVRLAPGVDGTDAINKNQLDTTLGEAGGILSEIKQTEKDIQDYIENFADDTTSLKGINWVYNNGSANGGETSILITREGPVFAVPTIYINGDRQSVGYHYSYDSGDKTIHLVKPLKAGDFVECVTSEGVLPLSNLLSTPDGASQIGTKSGLTVQDYLNGVKSATILRNIEPAIDGQRIVLSEISPTLGPKSGGILVYDQSDTSSVDDGYTVFVTAGGKRWKREESYIDVAWFGPNFGLALQTAVNLVDNYVRTVGFYSRKTIYIAAGNYTTDRQIDIPSYVSVVAIGNVNINGASLPVNSYVLRITNKVTGISTTQHSGWNLGSVGGTLRLVGNGSSNQVDGLFVGNTTAMSDVRNVSLYAVATSGVRYGLTFGSTNTYLFTATKCHFETSLVNLYCPYTTSANSGEKMVFNDTVFGGATRNHVEMSTPGMDLTFNNCSFDFTGGSIIYGTETWGYSKVGLNSCHFEGFDNLWVKVDAPQGGFIGSNRAITITNATVLPRRRSNTTGTNSPSRMHIDAKSTPVYISGLDLRHEVVPYTEEIFMASPETTLMLQGYLKDPYYQIPSKSYIQNRGWDITDETTGTLVNSSDTMDALTRFTCTERNALSAEVVDGGTSGKLLAMTGAGGYFTLVTKGFIPVSTHQRIGGAMSVQAAASTGNIHCTIGVQWFDYDGNLIGTNQSFTINMREVFNNSSLPNFAEGNNRFISTPTRAFRAPAGAAKCKPLWRISGHTGVVNISRLASFVL
Physico‐chemical
properties
protein length:875 AA
molecular weight: 95111,33160 Da
isoelectric point:5,68233
aromaticity:0,09143
hydropathy:-0,19474

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604 DC_0983
DC_1263
ATT
1–239
DC_1263 DC_1149
XCO41087.1
1 875
Architecture
ATT
STR
ATT 1-239 | STR 240-875
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41087.1
1 875
Domain Start End Length (AA) Confidence
N-terminal 1 367 367 0,9982
Central domain 368 698 332 0,9935
C-terminal 699 875 176 0,9704
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-367
Central
368-698
C-terminal
699-875

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146049
[NCBI] 		3232228 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41087.1 [NCBI]
Genbank nucleotide accession
PP889498.1 [NCBI]
CDS location
range 35609 -> 38236
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTACCCCACAGGGTCCACTGAGTTCGACATACCGTTCGACTACCTGTCCCGTAAGTTTGTCCGTGTGTCGCTGGTAGCTGACGACAACCGCAGACTTCTGAGTAATATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAGCTACTTGTGGAAACTACAGGGTTCGACCGTGTGGAAATCCGCAGATTCACCTCAGCGTCTGAGCGTATTGTTGACTTCAGCGATGGCTCGGTTCTACGCGCAACCGACCTTAACGTCTCTCAGCTTCAGTCTGCCCATATCGCAGAGGAAGCCCGTGACTCGGCACTACTGGCTATGCCGCAGGATGATGCTGGCAACCTTGATGCACGTAACCGCAGAATCGTTCGGCTGGCTCCGGGTGTTGACGGTACGGACGCAATCAACAAGAACCAGCTGGACACTACCTTGGGTGAGGCTGGTGGCATCCTGTCGGAAATCAAACAGACCGAGAAGGACATTCAGGATTACATCGAGAACTTTGCAGATGACACCACGTCTCTAAAGGGAATCAACTGGGTGTATAATAATGGGTCGGCCAATGGTGGAGAGACCTCCATTCTGATTACCCGCGAGGGGCCAGTGTTCGCTGTGCCTACCATTTACATAAACGGGGACAGGCAGTCTGTGGGTTACCACTACTCTTACGATTCCGGCGATAAGACCATTCACCTAGTTAAGCCCCTCAAGGCTGGAGACTTTGTGGAGTGTGTTACCTCTGAGGGTGTACTGCCGCTGTCTAACCTCCTGTCGACACCAGATGGTGCCAGCCAGATTGGCACTAAAAGCGGCCTGACTGTGCAGGACTACCTGAACGGCGTGAAGTCAGCTACCATTCTGCGCAACATTGAGCCAGCCATTGATGGACAGCGAATTGTCCTCTCTGAGATTAGCCCTACTCTGGGTCCTAAGTCTGGAGGTATTTTGGTGTACGACCAGTCTGACACATCCTCTGTGGACGACGGGTACACTGTTTTCGTGACGGCTGGCGGTAAACGGTGGAAGCGAGAAGAGTCCTACATTGACGTAGCGTGGTTCGGTCCGAACTTTGGTCTTGCCTTACAGACCGCTGTTAACCTCGTTGACAACTACGTGAGAACTGTCGGTTTCTACAGCCGCAAGACCATCTACATTGCAGCTGGTAACTACACCACTGACAGGCAGATTGACATACCGTCATATGTCTCCGTGGTTGCAATTGGTAACGTGAATATCAACGGAGCATCTCTTCCGGTTAACTCCTACGTACTCCGAATCACCAACAAGGTAACTGGAATCTCCACGACCCAGCACTCTGGTTGGAACTTAGGTTCGGTAGGCGGTACTCTCCGTCTGGTGGGTAACGGAAGCTCCAACCAAGTTGACGGGCTGTTTGTCGGAAACACTACGGCAATGAGCGATGTACGTAACGTCAGCCTTTACGCTGTGGCAACCTCAGGTGTACGCTACGGGTTAACATTCGGTAGCACCAATACGTACCTATTCACAGCGACCAAGTGTCACTTCGAGACCTCTCTGGTGAACCTGTACTGCCCGTACACCACTAGCGCCAACTCTGGTGAGAAGATGGTGTTTAATGATACTGTATTCGGCGGGGCAACTCGTAACCACGTTGAGATGAGCACTCCGGGGATGGACCTAACGTTCAATAACTGCTCGTTCGACTTTACCGGCGGTAGTATCATCTACGGGACGGAGACTTGGGGTTACTCTAAGGTTGGTCTTAACAGCTGCCACTTCGAAGGTTTTGACAACCTGTGGGTTAAGGTGGATGCACCTCAAGGTGGCTTCATTGGGTCCAACAGGGCAATCACTATCACAAACGCTACGGTACTTCCGCGTCGACGCTCGAATACGACTGGCACCAACTCACCTAGCCGAATGCATATTGATGCTAAGTCTACCCCTGTGTATATCAGCGGTCTGGACCTGCGCCATGAGGTTGTACCGTATACCGAGGAAATCTTCATGGCTTCCCCAGAGACCACGTTGATGCTTCAAGGCTACCTGAAAGACCCGTACTACCAGATTCCTAGCAAGTCATACATCCAGAACCGTGGGTGGGACATCACAGATGAAACCACTGGGACGTTGGTGAACAGCTCAGACACAATGGATGCACTGACCCGCTTTACGTGCACCGAGCGAAATGCTCTTTCGGCTGAGGTTGTGGACGGAGGGACTTCCGGTAAGTTACTGGCAATGACTGGCGCTGGTGGGTACTTCACACTAGTCACCAAAGGCTTCATTCCGGTGAGTACCCACCAGCGAATTGGTGGAGCAATGTCGGTTCAGGCGGCAGCAAGTACCGGAAACATCCATTGCACGATTGGTGTCCAGTGGTTCGACTACGATGGCAACCTAATCGGAACCAACCAATCCTTTACGATAAACATGCGAGAAGTGTTCAACAACTCTTCGCTGCCTAACTTCGCAGAGGGGAACAACCGCTTCATTTCCACGCCAACAAGGGCTTTCCGCGCACCAGCCGGGGCCGCTAAATGCAAACCGCTGTGGCGCATCTCTGGCCATACTGGCGTGGTTAACATCTCACGCTTAGCATCATTTGTGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9229bfb254d7695a06df5882379110343b97fe04af2922e23394eac605385999
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7527
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank