Protein

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Genbank accession
AUZ95081.1 [GenBank]
Protein name
hemagglutinin protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,79
Protein sequence
MHISLRGVNLSGTFNKWSPPPVDHFEVSEKNKQTVSKTNFGFTVEAEGNEVFVGAPNSGSLTGYSITGDTLTSLFSTAVFSNSGRLGYRLSASGNWLMAATSPASGNGEIYMFSKTAGSWNMTTPAQIITAPPAYTESGFSYGAAIDGTTLAVGHIKANTCGAVHIYDYNGTSWVYTTTLTVPSSSTPATTNQNIGFSVSIKGDLLVAGGPGDLTGNGNGVVMFSKRSNGVWSTPTITTISETTTSGFGFSVHTNGTRIVASAPAFTVGNVNGNIRLFDNSMNLLQILTVSNSNGTIIDPQSATSDRLGQSVSINDSGNVIAAGAQARQSNTGAVYTFEQINNVWSGTPSGIGGMLTGSGTTNNSRFGSSVAFTGDKTLIVGAFGITSVFMFK
Physico‐chemical
properties
protein length:393 AA
molecular weight: 40727,67380 Da
isoelectric point:6,51082
aromaticity:0,09160
hydropathy:-0,03359

Domains

Domains [InterPro]
IPR028994
STR
8–255
IPR028994 IPR028994
PTHR36220
Unmapped
26–342
PTHR36220
IPR011043
STR
114–383
IPR011043
AUZ95081.1
1 393
Architecture
STR
STR 8-393
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUZ95081.1
1 393
Domain Start End Length (AA) Confidence
N-terminal 1 21 21 0,8967
Central domain 22 220 200 0,8378
C-terminal 221 393 172 0,1361
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-21
Central
22-220
C-terminal
221-393

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage Atu_ph07
[NCBI] 		2024264 Uroviricota > Caudoviricetes > Polybotosvirus >
Host Agrobacterium tumefaciens
[NCBI] 		358 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUZ95081.1 [NCBI]
Genbank nucleotide accession
MF403008 [NCBI]
CDS location
range 243018 -> 244199
strand -
CDS
GTGCATATTTCGTTAAGAGGCGTAAATTTAAGTGGAACCTTTAATAAGTGGTCACCGCCACCAGTTGACCATTTTGAAGTGTCTGAAAAAAATAAACAAACCGTTTCAAAAACCAATTTCGGTTTTACGGTAGAAGCCGAAGGTAATGAGGTATTTGTTGGTGCGCCAAATTCAGGATCATTGACAGGATATTCAATAACTGGTGACACTCTTACGTCTTTATTCTCTACCGCAGTTTTCAGTAATAGCGGTCGTCTAGGCTATCGTCTATCTGCATCTGGTAATTGGTTGATGGCGGCTACGTCGCCAGCCTCCGGTAATGGTGAAATCTATATGTTTTCAAAAACCGCAGGCTCATGGAATATGACAACTCCAGCACAAATCATAACAGCGCCTCCCGCATATACTGAAAGCGGGTTTTCATATGGCGCTGCTATTGATGGAACAACCTTAGCTGTTGGACATATTAAAGCAAATACTTGCGGTGCGGTTCATATATATGATTACAATGGAACCAGTTGGGTATATACCACAACGTTAACTGTACCATCATCATCTACACCAGCAACAACAAATCAAAACATTGGTTTTAGTGTTAGTATTAAAGGCGATCTATTGGTGGCCGGTGGTCCCGGCGATCTTACTGGTAATGGTAACGGCGTTGTAATGTTTAGTAAAAGAAGTAATGGGGTATGGTCAACACCAACAATAACTACTATTTCTGAAACAACAACAAGCGGTTTTGGTTTTTCTGTTCATACTAATGGGACGAGAATTGTAGCATCTGCTCCAGCATTTACTGTTGGTAATGTTAATGGAAACATTCGCTTATTTGACAATTCAATGAACCTTTTACAAATACTAACGGTTTCTAACTCAAACGGAACGATTATTGATCCACAGTCTGCTACGAGTGATCGTTTAGGGCAATCGGTATCTATCAATGACAGCGGCAACGTAATCGCTGCCGGTGCGCAAGCTCGTCAATCTAATACGGGTGCTGTATATACGTTTGAACAAATTAACAACGTTTGGTCAGGAACCCCCTCTGGTATTGGTGGTATGTTAACCGGTTCTGGAACGACTAACAATTCTCGTTTTGGATCATCGGTTGCATTTACAGGTGACAAAACTCTTATTGTTGGTGCATTTGGCATAACATCTGTTTTTATGTTCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
717c8a557229c7af370fca58a09c2dbd063900fcab7e79907e4da7008c7ea894
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8867
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50