Protein

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Genbank accession
YP_010664248.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MQVGTADKLVSLVGLISIFGKRTFTANDYIRIPDVPGGFIVQFGTATTLASGDTIVTFPIPFPNKVLGIHPSQNNSYTNGAWAAYASKSLSSFALSGWTNATTRIAISVDYFAVGY
Physico‐chemical
properties
protein length:116 AA
molecular weight: 12327,85890 Da
isoelectric point:9,09934
aromaticity:0,12931
hydropathy:0,29741

Domains

Domains [InterPro]
G3DSA:2.60.40.3940
RBD
22–116
G3DSA:2.60.40.3940
G3DSA:2.60.40.3940
RBD
25–116
G3DSA:2.60.40.3940
IPR054075
RBD
36–116
IPR054075
YP_010664248.1
1 116
Architecture
RBD
RBD 22-116
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_201.16
[NCBI] 		2918921 Uroviricota > Caudoviricetes > Peduoviridae > Duonihilunusvirus YenM20116 >
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010664248.1 [NCBI]
Genbank nucleotide accession
NC_070914.1 [NCBI]
CDS location
range 22249 -> 22599
strand -
CDS
ATGCAGGTGGGAACTGCGGATAAGCTGGTTTCGCTGGTTGGGCTAATTAGTATCTTTGGCAAAAGAACATTCACCGCGAATGACTATATTCGAATTCCTGATGTTCCCGGTGGCTTTATTGTTCAATTTGGCACCGCAACAACCTTAGCATCAGGCGATACCATAGTGACATTTCCTATTCCATTCCCCAACAAGGTGTTGGGTATCCATCCATCACAAAACAACAGTTATACCAATGGCGCATGGGCTGCATATGCCAGTAAATCTCTTTCAAGTTTCGCTCTATCTGGCTGGACTAACGCAACAACACGCATTGCAATTTCTGTCGATTATTTTGCAGTAGGATACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
636399346ce23b9b35b5e8a4ef8e2c51bec57c8e03780173b5d270b835aebf4e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomes of temperate Yersinia enterocolitica phages Hammerl,J.A. and Hertwig,S. 2022-06-17 — GenBank