Protein

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Genbank accession
QOI72021.1 [GenBank]
Protein name
putative DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIMNKYGNTVVKNKIKKVLGSGRVVALLYDNGNLYMRGSNQYTNFGIASPSDYKNWVLVRTNVKEVWLNNYHTIIQTYDDQFLCAGYGRALGYGGTSYLWTVYDRLYTLTSTPATTVKQICLNIYGTFVLLNTNNNLYALGFNAYNCLGVGALNSTSTAFTLTRSSVKYVHSNLAGTFCIGTNNVLYARGLAQNYKMGNNSNTDMASWTTITLPAGYTYPVMAFEGYIHTLIYAASDSTLNDTAILYCGYTSTNPGGAIPPYGSNYTPTFRVGAGGTGNSFSSFGTGYLEIGHQSFYTDAGSTNLYSAGSAGPSLGSSTNKSTGFTIMPLPSTGITSFCSAGNADTTGVTFVVQNNILYACGNVTWLDATTYNFLPQEVPE
Physico‐chemical
properties
protein length:385 AA
molecular weight: 41586,15120 Da
isoelectric point:8,31876
aromaticity:0,13506
hydropathy:-0,05610

Domains

Domains [InterPro]
DC_0065
STR
1–235
DC_0065 DC_1781
IPR009091
STR
5–258
IPR009091
IPR009091
STR
17–366
IPR009091
QOI72021.1
1 385
Architecture
STR
RBD
STR 1-366 | RBD 367-385
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI72021.1
1 385
Domain Start End Length (AA) Confidence
N-terminal 1 53 53 0,0536
Central domain 54 257 205 0,6684
C-terminal 258 385 127 0,2126
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-53
Central
54-257
C-terminal
258-385

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_47
[NCBI] 		2768774 Uroviricota > Caudoviricetes > Eneladusvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI72021.1 [NCBI]
Genbank nucleotide accession
MT939487 [NCBI]
CDS location
range 351897 -> 353054
strand -
CDS
ATGTTACCCTTTCCAATAATGAATAAGTATGGGAATACAGTAGTAAAAAATAAAATAAAGAAAGTACTTGGATCAGGTAGAGTTGTTGCATTATTATACGATAATGGTAATTTATACATGCGGGGTTCAAATCAATATACTAATTTTGGAATAGCTTCACCTAGTGATTATAAGAATTGGGTACTAGTACGGACGAATGTTAAAGAGGTTTGGTTAAACAATTATCACACTATAATACAAACGTATGATGATCAATTCTTATGTGCTGGATATGGTAGAGCATTAGGATATGGTGGTACGAGTTATTTGTGGACGGTATATGATAGATTATACACATTAACCTCAACACCTGCAACGACAGTTAAGCAGATATGTTTAAACATATATGGAACATTTGTATTATTGAATACGAATAACAACTTATATGCTTTAGGATTTAACGCTTATAATTGTTTAGGGGTAGGTGCATTGAATAGTACTAGTACTGCATTTACATTAACACGTTCATCGGTGAAGTACGTTCACAGTAATCTAGCTGGAACGTTTTGTATAGGTACAAATAATGTATTGTACGCAAGGGGTTTAGCACAGAATTATAAGATGGGAAATAATAGTAATACTGACATGGCTTCATGGACTACTATAACATTACCTGCTGGATACACATATCCAGTCATGGCCTTTGAGGGATACATTCATACATTAATATATGCTGCATCTGATAGTACATTGAATGATACTGCAATATTATATTGTGGATACACATCAACGAATCCTGGTGGTGCTATACCTCCTTATGGTTCTAACTACACACCTACGTTTAGGGTTGGTGCTGGAGGAACTGGAAATTCATTTAGTTCATTTGGTACTGGATATTTAGAAATTGGTCACCAATCATTTTATACTGATGCAGGTAGTACAAATTTATATTCAGCGGGAAGTGCTGGGCCAAGTTTAGGTTCAAGTACTAACAAGAGTACTGGATTTACTATTATGCCATTGCCTAGTACTGGAATTACATCATTTTGTTCAGCGGGTAATGCTGATACTACAGGTGTTACATTTGTTGTACAGAATAATATATTATATGCCTGTGGTAATGTAACGTGGTTAGATGCGACTACATATAATTTTTTACCACAAGAGGTTCCAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2464c260610cfa83aa9807997c971f98a77262b4c431e378e4c85712ac2ea1ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_47 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank