Protein

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Genbank accession
CAM0044395.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTIPKITPYSGGVANPDGSQTQAEFTQNMFDQLSYEAELSTELNNTVDGINDTAIQVDVDANSASQSAAAAEAAVSGLDYKGLWPDTGGSANKGETWQTQVSGTPTGQYFTALQNTTVDPVGDDVNWRGVVSSQSLGGLSNYQAGSVLDVPTLKPPVGSVVNVTSRLNALFEIVFGGVPNGYDVINAGNGNTARLQVNGTYGFLEYFGGIGGGSDDTGAILAMIEWCNNNGKIPFTGMESQCLSPLVLANGIVGIKGQSKITFPEGFVNPEASDDRKLFCVWNKNYSKIYDENTADTFKIHGIEWRVDMLDSDGDINAIIGAANTDGVEIFDCKVSSADLVAAKPGARTCLSFYDANKNMKIHSNDLYNENTRAGGGVIWVQGGSGLNINDPQKTENIRIFRNNIYQTRPSDGDEAIALWGSGGVLQNVRVYENTFFLRGGGQGVTAFNTASEATTTGAIDDIKYERNTFYADIELNVIRLGGQYLPDDITNLEASDNRIFCETTNDSTSYAIRVVQTGDDVIVDRNFIENVGAVNFSRGIAGYGLFDNKTRASGNTIKGGFGRGMSFVYSATDNNIDGAEWGLEECVKCRGNELSDIKVYIAQFIGAENYEFVNNVGTMVSGAVFAIWATSRSTGSVNIKANSITTNDVATRSVILQGSGKQRVQINTFDGTGLIIAASNLVVSTDNDYYGTIA
Physico‐chemical
properties
protein length:695 AA
molecular weight: 74273,11230 Da
isoelectric point:4,41403
aromaticity:0,09065
hydropathy:-0,22489

Domains

Domains [InterPro]
DC_0837
STR
1–261
DC_0837 DC_1468
IPR011050
STR
215–532
IPR011050
IPR011050
STR
230–532
IPR011050
CAM0044395.1
1 695
Architecture
STR
RBD
STR 1-532 | RBD 533-695
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0044395.1
1 695
Domain Start End Length (AA) Confidence
N-terminal 1 217 217 0,9950
Central domain 218 684 468 0,9859
C-terminal 685 695 10 0,7005
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-217
Central
218-684
C-terminal
685-695

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage K43b
[NCBI] 		3105705 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0044395.1 [NCBI]
Genbank nucleotide accession
OZ196325.1 [NCBI]
CDS location
range 25593 -> 27680
strand +
CDS
ATGACAATTCCAAAGATTACGCCATATTCCGGCGGCGTAGCAAATCCAGACGGTAGCCAGACGCAAGCTGAATTTACGCAAAACATGTTTGACCAGTTGAGTTATGAGGCTGAATTATCGACTGAGCTAAACAATACTGTTGACGGTATAAATGACACGGCCATTCAAGTTGATGTTGATGCAAATAGTGCGTCGCAAAGTGCAGCAGCAGCAGAGGCGGCGGTTTCTGGATTGGACTATAAAGGCTTATGGCCAGATACGGGCGGCAGCGCTAACAAAGGTGAAACATGGCAAACTCAAGTGAGCGGTACGCCTACAGGACAGTATTTCACCGCCCTGCAAAACACAACAGTTGACCCGGTTGGTGATGATGTAAATTGGCGTGGTGTTGTTAGTAGCCAGTCTTTAGGAGGATTGTCTAACTATCAAGCTGGTAGCGTTTTAGATGTCCCAACATTAAAGCCACCAGTAGGATCAGTAGTTAATGTAACTTCTAGGCTTAATGCTCTTTTTGAAATAGTTTTCGGTGGTGTACCTAATGGATATGATGTTATTAATGCAGGTAATGGGAACACGGCAAGGCTTCAGGTAAATGGAACGTATGGGTTCCTAGAATATTTTGGTGGTATTGGTGGCGGGTCTGATGATACAGGTGCTATCCTGGCGATGATTGAATGGTGTAACAATAACGGTAAGATCCCCTTTACTGGAATGGAATCACAATGCTTATCACCCCTAGTGTTGGCTAACGGTATTGTAGGAATAAAAGGGCAATCAAAAATCACATTTCCAGAAGGTTTTGTAAATCCAGAAGCATCTGACGATAGAAAACTGTTTTGCGTGTGGAATAAAAACTACTCAAAGATATACGATGAAAATACCGCCGACACTTTTAAAATCCACGGGATTGAATGGCGTGTTGATATGCTTGATTCTGACGGTGATATTAACGCTATTATTGGAGCCGCAAATACGGACGGCGTTGAAATTTTTGATTGTAAAGTAAGCTCTGCAGACTTGGTGGCGGCTAAGCCTGGGGCTAGAACGTGTCTATCATTCTATGATGCTAACAAGAATATGAAGATACACAGTAATGACCTTTACAATGAAAACACACGGGCGGGCGGTGGCGTTATCTGGGTACAAGGGGGCAGCGGTCTTAATATCAATGACCCGCAGAAAACCGAGAATATTCGCATCTTCCGTAACAACATATATCAAACGCGACCGAGCGACGGCGACGAGGCTATCGCATTGTGGGGGTCTGGCGGCGTGTTACAAAATGTCCGAGTATATGAAAATACTTTCTTCTTAAGGGGTGGCGGTCAGGGTGTTACAGCTTTTAACACTGCATCGGAAGCCACTACGACTGGTGCTATTGACGATATTAAATACGAGCGCAACACGTTTTACGCAGACATAGAGCTGAATGTTATCCGTCTCGGCGGTCAATACTTACCTGACGATATAACTAATTTAGAGGCGTCTGACAACCGTATTTTCTGCGAAACAACTAACGATTCAACAAGCTATGCGATCAGGGTCGTGCAAACCGGTGACGATGTTATCGTAGACCGGAATTTCATTGAAAACGTGGGAGCCGTTAACTTTTCACGTGGTATCGCTGGGTACGGGCTGTTCGATAATAAAACCAGAGCGAGTGGTAATACCATTAAAGGCGGCTTTGGTAGGGGTATGTCTTTTGTGTATTCCGCAACAGACAACAATATCGACGGCGCGGAATGGGGTCTCGAAGAGTGTGTTAAATGCCGTGGTAATGAACTGAGCGATATTAAAGTTTACATCGCCCAGTTCATCGGCGCAGAAAACTACGAATTTGTTAATAATGTCGGGACCATGGTTTCCGGCGCAGTCTTTGCGATTTGGGCGACTTCCAGATCTACGGGGTCGGTTAATATAAAAGCGAACTCTATCACCACGAACGACGTCGCGACCCGCTCCGTGATATTGCAAGGGTCGGGGAAGCAGCGGGTGCAAATAAACACTTTCGACGGTACTGGACTTATTATCGCGGCGTCTAACCTAGTGGTATCTACAGACAATGATTATTATGGGACAATAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc5d39148ef8f7065f7450db09eff6e08501a49924fc19e5c245070a4b24d36f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7960
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50