Protein

View in Explore
Genbank accession
QBI79946.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTYATGNPLGSKDPRDLYDNAENFDAAMNDRVNTTWNDRFGVSRPTMKGYEEQFNDWLDAQGFEPGFLVYVDGSPLTVDRPTQLIQRGDNIYSVKRPASFPVELTGNWAADEPLLVAQVDRTLQDTLATSAGAGMIGYRERTVADRLNDTANVKDYGAIADGAYHPLSERFATLAEAQAVYPHATALTDSIDWAAYQAAINSGAPHVHAPGGHYVMNRGTLAERDIRYTGDGYATRVDFSLADGPGSCMLTQGELVQIGDLSVSVVKGARTLTFAAAPDLAPGDVVIVYNPTNGSWLADRDPYRAGEMWKVHSVSGSTVTIYGNSSSVYLFTEVDVYRMRGVRVSVDQMHFSPSDTYSIAPFKVVFGDGVKVSNYYASDVTLYTGLEVERCFDVSINAVSSPNRSPAVNDEYGITISNCHNFSVYGGYAAATRHAVALGGMDDVCCVPNRHGLIYGMNIEGIDLASDTSAGDMHGNADKITYDNCEFRNGVILQGRDATVRNSTVYGVSSASGEAIYGSEVYGGTYTIENNRFISYGDGASFGIVHISPSSTQREALLIIARNNTFELPNATGSTKVFFLRGRNSPLPISANIDGVHVHMASVAMQCFLFADDSIKSELLSNYLIIDNVYGPFGTSLLYPTTKNANIPTRQMEQSGEVTVTTNGTATALPASNVSFRYPYSKKPMAVACASGVNGVAFSSLGGQSPVPIVYAVVAASIRPGLVAATSSFTSGEQAVVGWRAGIKEI
Physico‐chemical
properties
protein length:747 AA
molecular weight: 80181,39380 Da
isoelectric point:4,99157
aromaticity:0,09639
hydropathy:-0,13869

Domains

Domains [InterPro]
DC_1559
ATT
1–174
DC_1559 IPR011050 DC_1729
IPR012334
STR
114–513
IPR012334
IPR049350
STR
252–340
IPR049350 IPR054136
IPR049350
STR
252–335
IPR049350
QBI79946.1
1 747
Architecture
ATT
STR
ENZ
RBD
ATT 1-174 | STR 175-537 | ENZ 538-636 | RBD 677-747
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBI79946.1
1 747
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9942
Central domain 192 645 455 0,9889
C-terminal 646 747 101 0,9744
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-645
C-terminal
646-747

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF23a
[NCBI] 		2563562 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI79946.1 [NCBI]
Genbank nucleotide accession
MK511001 [NCBI]
CDS location
range 28413 -> 30656
strand +
CDS
ATGACGACCTACGCCACCGGTAACCCGCTGGGCTCCAAAGACCCGCGTGATCTGTACGACAACGCCGAGAACTTCGACGCGGCGATGAACGACCGGGTGAATACCACGTGGAATGATCGTTTCGGCGTTAGTCGCCCAACGATGAAAGGGTATGAGGAACAGTTCAACGACTGGCTGGACGCCCAGGGCTTCGAGCCAGGTTTCCTCGTGTACGTCGACGGCTCCCCGCTGACCGTAGATCGCCCGACCCAACTGATCCAGCGCGGGGACAACATCTACAGCGTCAAGCGCCCGGCATCGTTCCCCGTTGAGCTGACCGGGAACTGGGCAGCCGACGAACCCCTGCTGGTGGCCCAGGTTGACCGGACGCTGCAAGACACCCTGGCCACCAGCGCTGGCGCCGGGATGATCGGCTATCGCGAGCGCACCGTCGCCGACCGCCTGAACGACACCGCCAATGTCAAGGACTACGGCGCTATCGCAGATGGGGCGTATCACCCGTTGTCAGAGCGGTTCGCTACGCTCGCCGAGGCGCAGGCGGTCTATCCGCACGCCACTGCGCTGACCGACAGTATCGATTGGGCGGCGTATCAGGCGGCAATCAACTCCGGGGCGCCGCATGTGCATGCGCCAGGCGGCCACTACGTCATGAATCGCGGAACTCTCGCTGAGCGGGATATTCGGTATACCGGCGATGGCTATGCTACCCGCGTGGATTTCAGCCTCGCAGATGGCCCAGGTAGCTGCATGCTGACGCAGGGTGAGCTTGTGCAAATCGGCGATCTGTCCGTGAGCGTGGTTAAGGGCGCTCGCACGCTGACATTTGCCGCTGCGCCAGACCTGGCTCCGGGCGACGTGGTCATCGTGTACAACCCCACCAACGGCTCTTGGCTGGCTGATCGCGATCCGTATCGTGCTGGCGAGATGTGGAAGGTCCATTCGGTAAGCGGCAGCACTGTCACGATCTACGGAAACAGCTCGTCGGTGTACCTGTTCACCGAGGTAGATGTATACCGCATGCGCGGCGTGCGCGTGTCTGTCGATCAGATGCACTTTTCGCCGTCTGACACATATTCCATTGCGCCGTTTAAGGTTGTGTTCGGAGATGGTGTGAAGGTTTCCAACTACTACGCTAGCGATGTCACGCTTTACACAGGGCTAGAAGTAGAACGATGCTTTGACGTTTCGATCAATGCGGTTTCAAGCCCGAACAGATCGCCGGCAGTCAATGACGAATATGGGATTACTATCTCGAACTGCCATAATTTCTCGGTGTACGGTGGTTATGCAGCGGCAACCAGGCATGCTGTCGCGCTTGGTGGAATGGATGATGTATGTTGCGTGCCCAACCGTCACGGACTGATATACGGGATGAACATTGAGGGGATCGACTTAGCGTCGGATACCAGCGCGGGAGACATGCACGGGAATGCCGACAAAATCACATACGACAACTGCGAGTTTCGGAATGGGGTAATTCTTCAAGGGCGCGACGCAACTGTTCGTAACAGCACTGTCTACGGAGTATCCAGCGCTTCCGGCGAAGCGATCTATGGATCGGAAGTATACGGTGGCACCTACACCATCGAGAATAATCGATTTATCAGCTATGGCGATGGCGCATCGTTTGGCATCGTCCATATATCGCCAAGCTCCACTCAGCGCGAAGCATTGCTGATCATCGCGCGAAACAATACATTCGAGTTGCCGAACGCCACGGGGTCGACGAAAGTGTTTTTCCTGCGTGGACGCAATAGCCCGCTTCCGATTAGCGCAAACATTGACGGAGTACACGTCCATATGGCATCTGTCGCGATGCAATGTTTCCTATTCGCGGACGACAGCATCAAGTCTGAACTTCTTTCTAACTACCTTATTATTGACAATGTTTACGGGCCATTCGGAACATCATTGCTTTACCCGACAACCAAGAATGCGAACATTCCTACGCGTCAGATGGAGCAGAGTGGGGAAGTAACAGTTACCACTAACGGAACTGCAACGGCTCTGCCGGCTTCCAACGTCAGTTTCCGATATCCATACTCTAAGAAGCCAATGGCGGTAGCCTGCGCATCAGGCGTCAACGGGGTAGCATTTTCTAGCCTTGGGGGGCAATCCCCGGTGCCAATTGTGTACGCCGTTGTCGCTGCTTCTATCCGGCCTGGACTGGTTGCTGCAACCTCTTCTTTCACCTCCGGAGAGCAGGCGGTCGTGGGGTGGAGGGCAGGAATCAAGGAGATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
251d6bfd7f35e13339f76879d0fd3e481ee4d46b5c9d3b7b77070f690c65902a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank