Protein

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Genbank accession
WPA90094.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLYDLQVAKKHQIFEAEVITGRQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGINDANKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGMLIWEQLGEGSVVNQPHMQTQTTPYTVYRFDDNGNWVTNPSTVLASVAQRMDKGYKPSVNDLDIWTNLPDNVKNQVAGATLRIMSGDNIIVENPEATFGGYLFTLCNRILVKNPRNFIAWESGITFENHQTAAWGTGNWVVGGEIKYGSGSAVLFIRNDGGDDHNGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDVNADTGAPTERVDDYTLAEYPWFHLPTQHIIRNIITRDCMGIGAWWDGQKNIIDNVVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYSTQGYAVYAPGSEISSVSCAGSGTKKILCTYVGDIQGGNINVQHGDNDMTLAMRPAMGGTINPSLLMTASCQVASPGNEASIVKLSAIQGGERVGEMQLNRLGFKHMSIPVASLQLPESALEHNSSIGFFFGSDGVLRILAKKPDGTYVTYTLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73168,03630 Da
isoelectric point:5,15748
aromaticity:0,09024
hydropathy:-0,24172

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–136
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
71–132
IPR040775 IPR011050
IPR015331
RBD
138–675
IPR015331
WPA90094.1
1 676
Architecture
ATT
STR
ATT 65-136 | STR 137-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPA90094.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9939
Central domain 155 583 430 0,9811
C-terminal 584 676 92 0,9339
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-583
C-terminal
584-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage fPSFA
[NCBI] 		3092332 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPA90094.1 [NCBI]
Genbank nucleotide accession
OR670332.1 [NCBI]
CDS location
range 1391 -> 3421
strand -
CDS
ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTTACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAGACAGGGTGGTGTAGCGGGTGGCGCAGATATCGACTACGCTACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTGCCCGCGGTCTTGCGTGACGCCGGTTTCTCTCCGGCGTCTTTTAACTTCACAACCGGCGGAACCCTGGGAATTAACGACGCCAATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAATTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCCGCGGCGTCTACCCCTCTAACAACCGGTGGCATTTCTGATTCTGCTTGGGTAGCTTTTGGGGACATCACCTTCCGTGCGGAAGCGGATAAGAAATTTAAGTACTCCGTTAAGCTGTCTGACTTTACTACGTTACAACAATTGGCGGATGCCGCTGTTGATAGTGTTCTTATCGACCGCGATTACAACTTCAGCAACAATGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATTGGTGATGGCATGTTAATATGGGAGCAACTCGGCGAAGGGTCTGTTGTGAACCAGCCGCACATGCAGACACAAACCACGCCGTACACGGTGTATAGATTCGACGACAACGGTAACTGGGTGACTAACCCATCAACGGTGCTGGCGTCGGTAGCCCAAAGGATGGATAAGGGGTATAAGCCAAGCGTTAACGATTTAGATATTTGGACCAACCTTCCTGATAATGTAAAAAATCAGGTTGCTGGTGCAACTTTGCGAATAATGAGCGGCGATAATATCATCGTAGAGAACCCAGAAGCTACATTTGGTGGGTATCTGTTCACACTCTGTAATCGTATTCTCGTAAAAAATCCACGTAATTTTATTGCCTGGGAGTCTGGTATTACATTTGAGAACCATCAAACAGCCGCATGGGGTACTGGTAACTGGGTGGTCGGTGGTGAGATAAAATACGGTTCTGGTTCTGCAGTTTTATTTATCAGAAATGACGGTGGTGATGATCACAATGGAGGGGTAAGGGATTTAATATCATATCGCGTTGGCGAATCTGGTGTTAAGACATATCAGAATGAAATCGGGGGACGGTCAGCCAGGAACTACCGTTTGGTGTTCGACAATATAACTACAATCCAGTGTTATTATGATGGGATTGATGTTAATGCTGACACGGGGGCGCCAACCGAACGTGTAGACGATTACACTCTTGCTGAGTACCCATGGTTCCATTTACCTACTCAGCACATCATCCGCAATATCATTACACGTGACTGTATGGGTATCGGCGCGTGGTGGGATGGGCAAAAAAATATCATTGATAATGTTGTAACCTACGAAGCCCATAAAGAGGGGATTTTCGACAGGGGTACTAACAATGATATTACTAATGTAACAGTTATAGGTGCAAACAAGGATTTAACTAACCTAAATCAGCTTACATGCGAAGGCGGCAGCAGATTGCGCGGAGTGATGATTCACGCATACTCTACACAAGGGTATGCCGTATACGCGCCGGGTTCCGAAATATCGTCTGTTTCGTGCGCGGGTTCTGGTACGAAAAAGATACTTTGTACGTATGTTGGTGATATTCAGGGTGGGAACATAAACGTACAGCATGGTGATAACGACATGACCCTGGCTATGCGCCCGGCAATGGGGGGCACAATAAATCCATCATTACTTATGACAGCAAGTTGCCAAGTAGCATCGCCTGGTAATGAAGCTAGTATTGTCAAGCTTTCGGCAATCCAGGGAGGGGAGCGTGTGGGTGAGATGCAGCTTAACCGCTTAGGCTTTAAGCACATGAGCATACCTGTTGCGTCTTTACAATTACCAGAAAGTGCTTTAGAACATAACTCATCTATAGGCTTTTTCTTTGGAAGTGATGGGGTGCTGAGAATCCTCGCCAAGAAACCAGACGGGACTTACGTAACCTACACCTTATCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
938752a5623809c483d01f60352c21d53e9554511cf08cd0fca834b10ce6e6c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7167
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50