Protein

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Genbank accession
YP_024424.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIQNKEPFVYATGNGVTATIPFTFPANSASDVYGAINGIDQSVTVVLSPDQINSPGGTLTFNGGAAPLGSSVLVYRNTKMEQTLSYPTKGSFPSKSHESAMDKLVMIAQDLNFLLASRCLRAPNGEKFIKELPPIQERAGKFLGFDPAGNPYAAAPIRGEDGTNGLPPYISDGTDGFNAGNWVAFSIQDNSYKDTGVRALGVDGLPPYISNGTDGFTSGNWIVDDGSTNYVDTGVRAKGDKGDKGDDALSPYVSDGTDGFTAGNWVADNGSGAYADTGIGAKGDKGDTGDDGLPPYISDGSDTFVAGNWIADNGSGVYVDTGIPARPNLQYATETTIGGMRWSLVGTTLNLYFTDV
Physico‐chemical
properties
protein length:357 AA
molecular weight: 37290,51190 Da
isoelectric point:4,28619
aromaticity:0,09804
hydropathy:-0,31289

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP2
[NCBI] 		260372 Uroviricota > Caudoviricetes > Enhodamvirus >
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_024424.1 [NCBI]
Genbank nucleotide accession
NC_005879 [NCBI]
CDS location
range 19364 -> 20437
strand +
CDS
ATGACTATCCAGAACAAAGAACCCTTTGTATATGCCACTGGTAACGGAGTGACGGCCACTATTCCCTTCACGTTTCCGGCCAACTCGGCCTCGGATGTGTATGGTGCAATCAACGGAATAGACCAATCAGTAACTGTGGTGCTGAGTCCCGACCAGATAAATAGTCCAGGCGGAACATTGACATTTAATGGCGGCGCGGCTCCCTTGGGTTCAAGTGTCTTGGTCTATCGCAACACAAAGATGGAGCAGACTTTGTCATACCCGACTAAGGGCAGCTTTCCATCCAAATCACATGAGTCTGCCATGGACAAACTGGTGATGATTGCGCAGGACTTGAACTTCCTTTTAGCATCTCGTTGCTTGAGAGCGCCGAACGGAGAAAAATTCATCAAGGAATTGCCACCAATCCAAGAACGCGCCGGAAAATTCCTTGGCTTTGACCCTGCAGGTAACCCCTATGCGGCAGCTCCGATTCGCGGCGAGGACGGCACAAATGGTCTTCCTCCTTACATCTCGGACGGTACTGATGGGTTCAACGCCGGAAACTGGGTAGCATTCTCCATTCAAGACAACTCGTATAAGGATACAGGCGTCCGTGCCCTTGGTGTTGATGGCTTACCTCCTTACATCTCGAACGGCACTGACGGGTTTACGTCAGGAAACTGGATTGTCGACGATGGAAGCACTAACTATGTTGACACGGGAGTGAGGGCGAAGGGAGACAAAGGCGACAAAGGCGACGACGCTCTATCACCTTATGTGTCCGATGGGACTGACGGATTCACCGCAGGAAACTGGGTCGCGGACAATGGCTCCGGTGCCTATGCGGACACAGGAATCGGGGCAAAAGGTGATAAGGGTGATACAGGCGATGACGGTCTACCGCCTTACATCTCGGATGGTAGTGATACCTTTGTTGCGGGCAACTGGATTGCAGACAATGGCTCTGGTGTGTATGTTGATACGGGTATTCCTGCTCGACCGAATTTGCAATACGCCACAGAAACCACAATCGGCGGTATGCGTTGGTCATTGGTTGGGACTACTTTAAACTTGTATTTTACGGACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5842392539122cf2be8623b400bffcce6cc9c180add81de6f9a3f29eba0e14d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7990
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Vibrio cholerae phage VP2 complete genome Wang,D., Kan,B., Li,Y., Liu,Z., Gao,S., Liu,Y., Liang,W., Zhang,L., Yan,M., Li,W., Liu,G., Liu,Y., Li,J., Diao,B., Zhu,Z. and Qiu,H. — — GenBank