Protein

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UniProt accession

A0A8S5PP99 [UniProt]

Protein name

YadA-like protein

RBP type

TSP

Evidence DepoScope

Probability 0,99

TSP

Evidence RBPdetect2

Probability 0,71

Protein sequence

MVAQVNKFSKLINIKGEINMNNKLVLATMVMAAVTGSTFANGLVVGQVEPNTTAPVVSGYNSAALGVNTVVTGTSTIVLGRDNKVSGNDTTVIGSNNGTVSANQTTIIGYNNKTNSNQEQVVIGANSETAGQGATVIGTHGKATAWDAYAVGNNTIADKSNSVALGTNSVTDDAVPTKQVVLNGVTHVFAGENPQSVVSVGSKDRAGFGGVKYYNRQITNVAAGQVDAASTDAVNGSQLYAAYDEIASMGAKLAKHDKDIKCLNIRVDRNVNNIKNLTAKVDNNYTTITNSINATNERVGANSKAIQDNTDAIKVNAGNIKANTDAINRHETVINNHATIINNHEQTLVDHANVLENHENRIESLERGMTRNVEREIGKAGAANAALSSLHYLGYNKDDKMTFSVGVGHYKGHSAVALGGFYAPNEHVMFSVGGTLGSEKMVNASVNFRLGKGSEYELNHKGKIKELETLVTKLVAEVEELKAGK

Physico‐chemical properties

protein length:	485 AA
molecular weight:	51143,43370 Da
isoelectric point:	7,23961
aromaticity:	0,04536
hydropathy:	-0,28268

Domains

Domains [InterPro]

IPR011049
STR
56–243

IPR011049 Coil IPR005594 Coil

IPR011049
STR
56–240

IPR011049 G3DSA:3.30.1300.30

cd12820
STR
58–172

cd12820 IPR008635 G3DSA:3.30.1300.30

IPR008640
Unmapped
58–81

IPR008640 IPR011049 G3DSA:1.20.5.170

IPR008640
Unmapped
147–169

IPR008640 IPR045584

A0A8S5PP99

1 485

Architecture

STR

RBD

ATT

STR 56-273 | RBD 274-394 | ATT 395-450 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011049	STR	IPR011049	56	243	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	56	240	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
cd12820	STR	DC_0258	58	172	InterPro cluster	cd12820	Central	Low	Positional only	46 proteins / 51 hits
IPR008640	Unmapped	-	58	81	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR011049	STR	IPR011049	96	220	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008640	Unmapped	-	147	169	InterPro	Trimeric autotransporter adhesin YadA-like, head domain	-	-	-	-
IPR008635	RBD	DC_0221	217	246	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits
G3DSA:1.20.5.170	STR	G3DSA:1.20.5.170	221	273	Merged direct domain	G3DSA:1.20.5.170	Central	Low	Positional only	8 proteins / 8 hits
IPR045584	RBD	IPR045584	232	446	Merged direct domain	Pilin-like	C-terminal	Low	Positional only	5 proteins / 5 hits
Coil	Unmapped	-	341	375	Coils	Coil	-	-	-	-
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	345	449	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
G3DSA:3.30.1300.30	RBD	G3DSA:3.30.1300.30	345	450	Merged direct domain	G3DSA:3.30.1300.30	C-terminal	Low	Positional only	62 proteins / 62 hits
IPR005594	ATT	DC_0200	395	448	InterPro cluster	Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domain	C-terminal	Medium	Text match	43 proteins / 43 hits
Coil	Unmapped	-	464	484	Coils	Coil	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

A0A8S5PP99

1 485

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	29	29	0,0009
Central domain	30	391	363	0,7664
C-terminal	392	485	93	0,5075

Note: Constraints were applied during segmentation.
Fixed 55 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-29

Central
30-391

C-terminal
392-485

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Podoviridae sp. ctOAf25 [NCBI]	2825245	Uroviricota > Caudoviricetes >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

DAE08331.1 [NCBI]

Genbank nucleotide accession

BK015468 [NCBI]

CDS location

range 9500 -> 10957
strand +

CDS

ATGGTAGCACAGGTAAATAAGTTTTCTAAATTAATTAACATAAAAGGAGAAATTAACATGAATAACAAATTAGTATTAGCAACAATGGTTATGGCAGCAGTTACAGGTAGCACATTTGCAAATGGTTTGGTAGTAGGTCAAGTAGAACCAAACACTACTGCACCTGTGGTTAGTGGTTACAACTCCGCAGCATTAGGTGTGAATACAGTAGTTACTGGTACAAGCACAATCGTTTTAGGTCGAGATAATAAAGTTAGCGGTAACGATACAACTGTTATCGGTTCTAACAACGGAACAGTAAGTGCTAACCAAACTACAATCATCGGTTACAACAACAAAACAAATAGCAACCAAGAGCAAGTGGTAATCGGTGCTAACTCCGAAACCGCAGGTCAGGGTGCAACAGTAATCGGAACGCACGGCAAAGCTACTGCATGGGATGCTTACGCAGTAGGTAACAATACAATCGCAGATAAAAGTAACAGCGTGGCACTAGGTACTAATTCCGTTACAGATGATGCAGTACCAACAAAACAAGTAGTATTGAATGGGGTAACCCATGTGTTCGCTGGGGAAAACCCTCAATCTGTAGTGAGTGTAGGTTCTAAAGATAGAGCAGGGTTCGGTGGCGTGAAATATTACAACCGCCAAATTACAAATGTTGCAGCTGGACAAGTTGATGCAGCATCTACAGATGCAGTCAACGGCAGTCAGTTGTACGCTGCCTACGATGAAATCGCATCTATGGGTGCAAAACTTGCGAAACACGATAAAGATATTAAGTGTTTGAATATTCGTGTAGACCGCAATGTAAATAACATCAAAAATTTAACCGCTAAGGTTGATAACAATTACACAACGATTACTAACTCTATCAACGCAACAAACGAGCGTGTAGGTGCAAATTCTAAAGCCATTCAAGATAATACAGATGCTATCAAAGTAAATGCTGGCAATATCAAAGCAAATACAGATGCTATTAATCGTCATGAAACAGTAATTAACAATCATGCAACGATCATTAATAATCACGAACAAACTTTAGTAGACCATGCAAACGTATTAGAAAACCATGAAAACCGCATTGAAAGCCTAGAACGTGGTATGACACGAAATGTAGAACGTGAAATTGGTAAAGCTGGTGCAGCGAATGCAGCATTATCCTCACTTCATTACCTAGGCTATAACAAAGACGATAAAATGACATTCTCCGTTGGTGTAGGTCATTACAAAGGTCATAGTGCGGTAGCATTAGGCGGTTTTTATGCTCCAAATGAACACGTTATGTTTAGCGTAGGTGGTACGTTGGGTAGCGAAAAAATGGTAAATGCTAGTGTGAACTTCCGATTGGGTAAAGGTTCTGAATACGAACTCAACCACAAAGGCAAAATCAAAGAACTTGAAACATTGGTTACTAAGTTAGTAGCGGAAGTGGAAGAATTAAAAGCTGGTAAATAG

Genome Context

Gene Ontology

	Description	Category	Evidence (source)
GO:0019867	outer membrane	Cellular Component	IEA:InterPro (UniProt)
GO:0015031	protein transport	Biological Process	IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID

db9fcb89866a898338ab534aeccbb0addcccc38db277d982d0a3813df81f01f3

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8512

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence