Protein

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Genbank accession
CAB4140681.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSVNPSPIAGFAGQFFDNNGVILSGGKIYTYAAGTTTPQATYTSATGVTPHANPIVLDSAGRVPGGEIWLTDSLIYKFVIETSTAILIGTYDNITGVNSNFVNYTVQEEVITATAGQTVFNLTTINYTPGTNSLSVYIDGVNQYVGDSYLETDSDTVTFTAGLHVGAEVKFSTAVPVTTNTIDAANVSYDPPFTGSVPTNVEDKLAQYVSVKDFGAVGDGVTDDTAAIQAAIDTQRGVYFPRGTYLCTGTLTLTYNAGRLFGEDQYNTIIQGSPDSNYPILQIGMAGGTWGQYGNVSIDNLRIDGGRVVGAPSSASKGIETLWAAHLRLNNVRITNTRGYGMEMYTGGYSSILNCNITGHGITGLYLHGIDATDSVTSTLVQSCQISSNGTYGIHAKNFFNITLDANILEDIGTGGVGAAIKMEGSALRNMSIIHNYLEANNDAAYDIDGGGIGIQGLSIQDNWLAGTPATSTYNFAGSTLVNAIVQGNEGGDTVVSALSGINGLRSLELLGSANVNTSAQIITSTIGGFSQDLCTVTMSAGTWIIEGVLQTEDAGGCVSVAAGIALSNAPGQSGKKVETNVNFSGAADYTESFAAGDVARLQFTTYVTVTSTTTQYMAAYIDISAGSLAYKGQLRAVRVA
Physico‐chemical
properties
protein length:641 AA
molecular weight: 66799,29600 Da
isoelectric point:4,38191
aromaticity:0,08580
hydropathy:0,05959

Domains

Domains [InterPro]
IPR012334
STR
168–622
IPR012334
IPR011050
STR
206–489
IPR011050
IPR024535
ENZ
208–414
IPR024535 IPR006626
IPR006626
Unmapped
324–346
IPR006626 IPR006626 IPR006626
CAB4140681.1
1 641
Architecture
STR
STR 168-622 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4140681.1
1 641
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,9909
Central domain 225 504 281 0,9931
C-terminal 505 641 136 0,9942
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-504
C-terminal
505-641

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4140681.1 [NCBI]
Genbank nucleotide accession
LR796372 [NCBI]
CDS location
range 29890 -> 31815
strand +
CDS
ATGTCGGTCAATCCCTCTCCCATTGCGGGCTTTGCAGGCCAGTTTTTCGACAACAACGGCGTCATCCTGTCTGGCGGCAAGATTTACACCTATGCGGCTGGCACGACCACGCCGCAGGCGACGTACACGTCCGCTACGGGCGTCACGCCGCACGCCAACCCGATTGTGCTCGACAGCGCCGGCCGCGTGCCGGGCGGCGAAATCTGGCTGACCGACAGCCTGATCTACAAGTTTGTCATTGAGACCTCGACGGCGATCCTGATCGGCACCTACGACAACATCACGGGCGTCAACTCAAACTTCGTCAACTACACGGTGCAGGAAGAGGTCATTACGGCCACGGCCGGCCAGACCGTCTTCAACCTGACGACGATCAACTACACGCCCGGCACCAACTCGCTGTCGGTCTATATCGACGGCGTCAACCAGTACGTCGGCGACAGCTATCTGGAAACGGACAGCGACACCGTGACGTTTACGGCCGGCCTGCACGTCGGCGCCGAGGTCAAGTTCTCGACCGCTGTGCCGGTGACAACCAACACCATCGACGCGGCCAATGTCAGCTACGATCCGCCGTTTACCGGCAGCGTCCCGACCAACGTCGAAGACAAGCTGGCCCAATACGTTTCGGTCAAGGACTTTGGCGCTGTCGGCGACGGTGTGACGGATGATACGGCGGCTATTCAGGCGGCGATTGATACGCAGCGAGGAGTGTATTTTCCGCGGGGGACGTATCTTTGTACCGGCACCCTGACGCTCACGTACAACGCTGGCAGGCTGTTTGGCGAGGATCAGTACAACACAATCATTCAGGGTTCGCCGGATAGCAACTATCCAATTTTGCAGATCGGCATGGCTGGCGGAACTTGGGGGCAGTATGGCAACGTCTCCATTGACAATCTTCGCATTGACGGTGGTCGCGTCGTCGGCGCACCATCATCTGCTTCAAAGGGTATTGAAACGCTTTGGGCTGCGCATCTTCGCCTGAATAACGTGCGTATCACCAATACGCGTGGCTATGGCATGGAGATGTACACGGGCGGTTATTCTTCAATTTTGAATTGCAACATTACCGGGCACGGCATCACCGGCCTGTATCTTCATGGGATTGACGCTACTGACAGCGTAACGTCTACACTGGTTCAGAGTTGCCAAATTAGCAGCAACGGCACCTATGGCATTCACGCCAAAAACTTTTTTAACATCACGCTTGATGCTAACATTCTCGAAGATATTGGCACCGGCGGCGTAGGCGCAGCCATCAAGATGGAAGGCTCCGCATTGCGGAATATGTCCATCATTCACAACTATCTTGAAGCCAATAACGACGCCGCTTACGACATTGATGGCGGCGGCATCGGCATTCAAGGGCTGTCTATTCAAGATAACTGGTTGGCGGGAACTCCAGCCACCAGCACATATAATTTTGCTGGCTCCACTTTGGTCAATGCTATTGTGCAAGGAAACGAGGGCGGCGACACTGTGGTCAGCGCGCTTTCCGGTATTAACGGTCTGCGCTCCCTTGAATTGCTTGGGTCTGCCAATGTCAATACATCAGCACAGATAATTACCTCGACCATCGGCGGCTTTAGCCAAGACCTTTGCACCGTAACCATGTCGGCTGGCACTTGGATCATAGAGGGTGTTTTGCAAACAGAAGACGCTGGCGGGTGCGTTTCTGTAGCGGCTGGCATTGCCCTATCTAACGCACCGGGGCAGTCGGGCAAAAAGGTTGAAACTAACGTCAACTTTTCTGGCGCTGCGGACTACACGGAAAGTTTTGCGGCTGGCGATGTGGCGCGGCTTCAATTTACAACCTACGTAACCGTCACTAGCACAACAACGCAATATATGGCGGCGTACATAGATATTTCCGCGGGCAGTCTTGCTTACAAGGGTCAGTTGCGGGCTGTTCGCGTAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a374cbad60cf9cf42370356d82360314dde03d2c99eb9467b78202d0690c6639
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8263
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50