Protein

View in Explore
Genbank accession
AIX22802.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MSQLNVDIIKHSTGTGPGIDITSAGNVAIDTNTLFVDSVNDKVGIGTVTPNAALEITGTGGIILDSLPLREKYSVRSGTVNSNDTIILTEGNIHLFTTDSTGNWSPDFTGGSVTLNSLLNVGQVVVVTIISSCGGSSGYPTSLAIDGSGVSVDWFGGSAPNARGGTSGWDQYQYTVIKHSDASYYVLATANHFE
Physico‐chemical
properties
protein length:194 AA
molecular weight: 20076,88320 Da
isoelectric point:4,47751
aromaticity:0,07216
hydropathy:0,04433

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-MbCM6
[NCBI] 		3126011 Uroviricota > Caudoviricetes > Pantevenvirales > Namakavirus > Namakavirus smbcm6
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX22802.1 [NCBI]
Genbank nucleotide accession
KJ019064.1 [NCBI]
CDS location
range 30081 -> 30665
strand +
CDS
ATGTCGCAATTAAATGTAGATATAATTAAACATTCCACGGGTACTGGTCCTGGTATTGATATCACCTCAGCAGGTAATGTTGCTATTGACACCAATACTTTGTTTGTTGACAGTGTAAATGATAAGGTGGGAATCGGCACTGTCACTCCAAATGCTGCCTTGGAAATTACTGGCACTGGTGGTATTATTTTAGATTCATTACCACTGAGAGAAAAGTATTCTGTTAGAAGTGGCACTGTAAACAGTAATGACACTATTATCCTGACTGAGGGTAACATTCATCTTTTTACTACTGATAGCACTGGAAACTGGTCACCAGATTTCACAGGTGGATCAGTTACATTGAATAGTTTACTCAATGTTGGGCAAGTAGTTGTTGTTACAATTATTTCTAGTTGTGGTGGATCTTCTGGATATCCTACTTCTCTTGCCATTGATGGATCTGGTGTAAGTGTAGATTGGTTTGGTGGTAGTGCTCCTAATGCTAGAGGCGGTACCTCAGGTTGGGATCAATATCAATATACAGTTATTAAACACAGTGATGCTAGTTATTATGTATTAGCAACAGCAAACCATTTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
64a8c6be0b2d5d799ea52283bb3138b1c27876cbad60f6e044d0f3d59b566856
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7779
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank