Protein

View in Explore
Genbank accession
AIM40646.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLYRIQSTALGQSGNTLLILPNATITVRDANGDLARLYADPDEITEIPNPTLSDAAGGYDFYVEYGDYYDITVALNGQSVDDRVYPIDMGLGARVDAAAATATEQAGIATTKAGESNASAVTSQAWAESATAPGDPGTKSAKTWAGEAAGDATAAAGSAAKAELFDGPKFNTIALMALYEDAKAGDVATVLSAFNGGVEHFDWIEGGSLTADGALVVDGVGGQWVSKRTVYADWAEFDNDARIHPAGTYLIVRGYGHYITTEAGETFETTVGNKVIVQKEGDGAYHTRAFGPPSGTDDTAKIQALLALSSGGKIVFDYFVGSYFVGLLLPGANTHIVLMPGVTLEGISGGSRVFQIQKENIVLEGYGATLKRNPMQTSHVVYINASTSNWARHIRIRGLKIVGNGASGTGGTGENDCIYVGGSPQGVGGNPALDAIPEDVIIEDCECISPRRNVISIVAGDNVTVRNNDLDGTGAVVLQCGVDIEANTYMTDGSSAVKRIKVHDNRLRNCAGINLAVVFGDDVEFFGNDMEITDPTASGIGGGAGGAQFNDNVYREGDRLGATAFDQATGVITVRVSGDTTLHELGIHEGMWVQGSVKLSSGATFPVGMDSPYRYVISWISDDGLQMRVSTGEGYGEITSFSGAETGTLDNDPTVSDLSFLVFREGQCSNIKARDNKINYVGVSGAFDAFNISTCYNWELSNNSVEMGLSTGQQIRATFGYGLTINGGYGRGGIRGLSAGAFSAVSATNHTVKETTLDAYSLTGPFVLSGCKAIACLGDIIDSSNATGALVRKFKAVKGTSSSSFGIKIAAGDRPRIEYSDFSGAGSSAVTSVSLGPSVTNASVVQSKVFGGVIFAAGSKLYNPASLADGEGVSTTVSAPGASFGMPVDVTFPVNLQGVQVTAWVQGSNVIGVRFQNETGAAVDLAEATLSVACR
Physico‐chemical
properties
protein length:935 AA
molecular weight: 97087,73360 Da
isoelectric point:4,63473
aromaticity:0,08021
hydropathy:-0,01679

Domains

Domains [InterPro]
DC_1669
ATT
15–190
DC_1669 IPR012334 DC_1409 IPR006626
IPR011050
STR
285–554
IPR011050 IPR011050 IPR006626
IPR011050
STR
292–554
IPR011050 IPR006626
IPR006626
Unmapped
391–422
IPR006626 IPR006626 IPR006626
AIM40646.1
1 935
Architecture
ATT
STR
RBD
STR
RBD
ATT 15-190 | STR 281-597 | RBD 598-654 | STR 655-756 | RBD 757-860 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIM40646.1
1 935
Domain Start End Length (AA) Confidence
N-terminal 1 298 298 0,9952
Central domain 299 579 282 0,9720
C-terminal 580 935 355 0,2663
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-298
Central
299-579
C-terminal
580-935

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage NYA-2014a
[NCBI] 		1526550 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sulfitobacter sp. CB2047
[NCBI] 		1525218 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Sulfitobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM40646.1 [NCBI]
Genbank nucleotide accession
KM233261 [NCBI]
CDS location
range 7690 -> 10497
strand -
CDS
ATGCTGTACCGCATTCAATCCACTGCCCTCGGGCAGTCTGGGAACACGTTGCTGATCCTGCCAAACGCCACAATCACCGTGCGCGATGCCAACGGGGATCTGGCGCGCCTCTACGCTGACCCAGACGAAATCACGGAAATCCCAAACCCGACGCTTTCGGATGCCGCCGGCGGCTATGACTTCTATGTTGAGTATGGCGATTACTACGATATCACGGTCGCGCTGAACGGGCAGTCTGTTGATGACCGCGTTTACCCGATCGATATGGGGCTCGGGGCCCGCGTCGACGCAGCGGCGGCAACAGCGACGGAACAAGCGGGCATTGCAACGACGAAGGCGGGGGAATCCAACGCCAGCGCCGTCACTTCGCAAGCATGGGCGGAATCCGCCACAGCCCCCGGCGATCCCGGCACCAAGAGCGCCAAGACGTGGGCGGGCGAGGCGGCAGGCGACGCAACAGCAGCGGCGGGAAGCGCGGCCAAGGCTGAGCTATTCGACGGGCCGAAGTTCAACACCATCGCGCTCATGGCGCTGTATGAGGACGCAAAGGCGGGCGACGTTGCCACGGTTCTCAGCGCATTTAACGGCGGCGTTGAGCATTTCGACTGGATCGAGGGGGGTAGCCTAACCGCAGACGGGGCGCTTGTCGTGGATGGCGTCGGCGGGCAGTGGGTGAGCAAGCGGACGGTGTATGCGGATTGGGCGGAGTTTGACAACGACGCTCGTATTCATCCCGCCGGCACCTATCTAATCGTACGCGGATACGGGCATTACATCACGACCGAAGCGGGCGAGACATTCGAGACGACCGTCGGAAACAAGGTAATTGTTCAGAAAGAAGGCGACGGGGCGTATCACACTCGCGCTTTTGGACCCCCATCTGGGACAGATGACACGGCCAAAATTCAAGCGTTGCTGGCGCTTTCATCTGGTGGGAAAATAGTTTTTGATTACTTCGTTGGCAGCTATTTCGTGGGGCTTCTGCTTCCGGGCGCAAACACGCATATTGTTCTGATGCCTGGGGTAACGCTAGAGGGCATTAGCGGCGGTTCCCGTGTATTCCAGATTCAAAAGGAAAACATTGTTCTTGAGGGATATGGCGCTACGCTTAAACGCAACCCCATGCAAACGTCTCACGTAGTTTATATCAACGCCAGCACGTCAAACTGGGCGCGGCATATCCGGATTCGCGGTCTCAAGATTGTCGGGAATGGTGCGTCAGGAACGGGCGGAACGGGCGAAAACGATTGTATCTATGTAGGCGGTAGCCCCCAAGGGGTCGGCGGGAACCCCGCGCTGGATGCGATCCCAGAAGATGTAATCATTGAGGATTGTGAGTGCATTTCCCCCCGTAGAAACGTTATCTCAATCGTTGCTGGTGATAATGTGACTGTCCGGAACAATGATCTAGACGGTACTGGCGCTGTAGTTCTCCAATGTGGTGTAGATATTGAAGCGAATACCTACATGACTGATGGGTCAAGTGCCGTTAAACGCATCAAGGTCCACGATAACAGGTTGCGGAACTGCGCGGGTATCAACCTCGCTGTAGTATTTGGGGATGATGTCGAGTTTTTTGGTAATGACATGGAGATTACAGACCCGACAGCTTCGGGCATCGGTGGCGGTGCGGGTGGGGCGCAGTTTAACGATAACGTATATCGTGAAGGTGACCGACTGGGTGCTACGGCTTTTGATCAAGCAACAGGGGTAATCACCGTTCGGGTAAGTGGTGACACAACTTTACATGAGTTAGGCATTCACGAAGGTATGTGGGTGCAAGGTTCTGTTAAGTTGAGCAGCGGAGCTACATTCCCTGTAGGGATGGACTCACCATATCGTTACGTTATTTCGTGGATCAGTGACGACGGATTGCAAATGAGGGTATCCACAGGAGAGGGGTACGGGGAGATAACTTCTTTTTCCGGCGCTGAAACAGGGACACTAGACAATGATCCTACTGTCTCTGACTTGAGTTTCCTTGTTTTCCGTGAAGGTCAGTGTAGCAATATCAAGGCCCGAGACAATAAAATAAACTACGTGGGTGTTTCAGGCGCTTTTGACGCTTTCAATATATCAACGTGTTATAATTGGGAGCTTTCAAATAACTCTGTGGAAATGGGTCTTTCTACAGGACAGCAGATCAGAGCGACATTCGGGTATGGCTTAACTATAAATGGTGGATATGGTCGAGGAGGGATACGTGGACTGAGCGCCGGGGCGTTTAGTGCTGTATCAGCTACAAACCATACTGTAAAAGAGACTACTTTGGACGCCTACAGCCTGACCGGACCCTTTGTTCTTTCTGGGTGCAAGGCAATCGCCTGCTTGGGAGATATTATTGATTCTTCAAACGCCACGGGGGCGCTTGTCAGGAAGTTCAAAGCGGTAAAAGGTACATCTTCATCTAGCTTTGGCATTAAGATCGCAGCGGGCGACCGACCAAGGATTGAATACTCTGATTTCTCCGGCGCAGGTTCAAGTGCAGTTACTTCAGTCAGCTTGGGGCCGAGCGTCACAAATGCCAGCGTTGTCCAATCCAAGGTTTTTGGAGGGGTTATATTCGCGGCAGGGTCGAAGCTGTATAATCCCGCTTCGCTTGCCGATGGCGAGGGTGTCAGCACAACTGTCAGCGCACCGGGCGCAAGTTTCGGGATGCCTGTTGATGTGACATTCCCTGTAAACCTTCAGGGTGTACAAGTGACTGCTTGGGTGCAAGGTAGCAACGTGATCGGTGTCCGGTTCCAGAACGAAACAGGTGCAGCCGTCGATCTTGCGGAAGCAACGCTGAGTGTAGCGTGCCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8675c4973d6c70f1e935f16a2b49b9b4854d8adbb95be305cd2199527ee77f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7758
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequene of the Sulfitobacter sp. 2047 prophage Ankrah,N.Y.D., Budinoff,C., Hadden,M., Lane,T. and Buchan,A. 2014-02-27 — GenBank