Protein

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Genbank accession
AUR85282.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MAVKLNDEFGSRATPPSSAYPAGSLKDETNPGVSNDGSPLSSRVGNDFQGFMQSALAEAGIDANGNPDSVDNPQILNAIKSITDDRFNYDGLVYHAVGNISDFAGQQLQEADKTNAYQYPDNSRQFYVADKSQAFPVTIPADPAGDVNWREVVGAFDIESIENNINSIRPDNEDVDLFIIYGQSNARGSAADTEGRTPITDSAIYWSRENQDLRQMTYTMESAFNDGVLSTGHAWGAFANTYHQKTLRKTYWIPGAIGGKNITQLSKTVGEGIYEALLTQYNLAIAELTSQGITPSTVNLVFHQGETDQSGGTAYNDYIALMNALFDDFVTDFGVTRFYVASVGNPQSRPETSWHVIRGAQESVCATRDDSCIAYTQFKSYTQTNGLLRNDGTHATQRGYNVMGQSMADFVVNKDRLRHPDPDSEVLGQNTHLAVVGANQPRLMSGTVRLNGVNGLLTRDNNSRFISSFVTEDVTLSSTSVIARASGSKNNYFHNVSCQAVSNENTREVINCSAITSVSSGVASLIIRLNMAKSFIIDTSNGNIRSAIDGAVGDLGLFTSRSISTNMLSTLVSVNHNTVDCLPMITKITSSAISDPFDTTAVVPQYVDQTSFRVPKDIGLILVAFPSLPLRPDDVATGRTVNVTFSAMVSDAAN
Physico‐chemical
properties
protein length:654 AA
molecular weight: 70714,34520 Da
isoelectric point:4,77404
aromaticity:0,08104
hydropathy:-0,28165

Domains

Domains [InterPro]
DC_0226
STR
1–612
DC_0226
IPR052940
Unmapped
171–413
IPR052940
IPR036514
STR
174–430
IPR036514
IPR005181
ENZ
175–411
IPR005181
SSF52266
STR
175–424
SSF52266
AUR85282.1
1 654
Architecture
STR
STR 1-612 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR85282.1
1 654
Domain Start End Length (AA) Confidence
N-terminal 1 310 310 0,5838
Central domain 311 509 200 0,1972
C-terminal 510 654 144 0,9860
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-310
Central
311-509
C-terminal
510-654

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.071.A._10N.286.46.A12
[NCBI] 		1881313 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85282.1 [NCBI]
Genbank nucleotide accession
MG592448.1 [NCBI]
CDS location
range 30779 -> 32743
strand +
CDS
ATGGCTGTAAAATTAAATGATGAATTTGGATCTAGAGCTACCCCTCCAAGCTCAGCGTACCCTGCCGGCTCACTTAAAGATGAGACCAATCCAGGTGTGTCAAATGATGGCTCGCCTTTATCTTCTCGCGTTGGCAATGACTTCCAAGGATTCATGCAGTCTGCTCTTGCTGAGGCTGGTATTGATGCCAATGGGAATCCTGATAGTGTTGATAACCCTCAGATTCTAAATGCGATCAAATCAATCACAGATGATAGATTTAACTATGATGGATTGGTTTACCATGCTGTTGGCAATATCTCAGACTTTGCTGGACAGCAACTGCAAGAAGCTGACAAAACAAACGCATATCAATACCCTGATAACTCGCGCCAGTTTTACGTGGCTGATAAATCCCAAGCATTCCCAGTTACAATTCCTGCCGATCCTGCTGGTGATGTAAATTGGCGTGAGGTTGTTGGTGCTTTTGATATTGAAAGTATTGAAAACAATATAAATTCAATTCGCCCGGATAATGAAGATGTTGATTTATTTATTATTTATGGTCAATCAAACGCAAGGGGTAGTGCGGCAGATACAGAGGGGAGGACGCCAATTACAGACAGCGCTATTTATTGGTCTAGAGAAAACCAGGACTTGCGACAGATGACATATACAATGGAATCCGCTTTTAATGACGGGGTTCTGTCAACAGGTCACGCCTGGGGTGCATTTGCAAATACTTACCATCAAAAGACGCTTCGTAAAACGTACTGGATTCCAGGCGCTATTGGCGGTAAGAATATAACTCAACTATCAAAGACGGTAGGTGAAGGTATATACGAAGCTCTACTTACACAATACAACCTGGCAATTGCAGAACTAACAAGCCAAGGCATTACGCCGAGCACCGTTAATCTAGTGTTCCATCAAGGCGAAACAGATCAGTCGGGAGGAACAGCGTATAATGACTACATCGCGTTAATGAATGCATTGTTCGATGATTTTGTGACTGATTTCGGGGTGACTAGATTTTATGTTGCATCTGTAGGAAATCCACAAAGCAGACCTGAGACAAGCTGGCATGTAATCCGAGGGGCGCAAGAATCCGTATGCGCTACCAGAGATGATAGCTGCATTGCTTACACCCAGTTCAAGTCTTACACGCAAACTAACGGCCTTCTTCGTAATGACGGTACTCACGCAACTCAACGAGGTTATAATGTCATGGGTCAATCTATGGCTGATTTCGTTGTTAATAAGGACCGACTTAGACACCCAGACCCTGACAGTGAGGTTTTAGGCCAAAATACACACCTAGCCGTGGTAGGTGCAAATCAACCTAGATTAATGAGTGGAACAGTGCGGCTCAATGGCGTTAATGGATTGCTGACACGCGATAATAACAGTCGGTTTATATCATCTTTCGTAACTGAAGATGTCACGCTATCCTCAACTAGTGTTATAGCTAGAGCTTCAGGCTCTAAAAACAACTACTTCCATAACGTTTCCTGTCAAGCTGTTTCAAATGAAAACACAAGAGAGGTTATAAATTGTAGTGCTATAACAAGTGTTAGTTCAGGTGTGGCGTCCTTGATAATACGATTAAACATGGCTAAATCGTTCATTATTGACACGTCAAACGGAAATATTCGTTCAGCTATAGACGGAGCGGTCGGTGATTTAGGTTTGTTTACATCCAGATCTATAAGTACCAATATGCTATCTACCTTGGTAAGCGTTAACCATAATACGGTTGATTGCTTACCTATGATTACAAAGATAACGTCTAGCGCAATATCAGACCCATTCGATACGACAGCGGTAGTGCCTCAGTACGTAGACCAGACAAGCTTTAGGGTGCCAAAGGATATCGGATTAATTTTGGTTGCTTTTCCTAGCCTACCTTTGCGCCCGGACGACGTAGCTACTGGAAGAACTGTAAACGTCACATTTTCTGCGATGGTTTCTGATGCGGCGAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7098a12e9fd89a3d0125d0bc0035d5b6ce4890e1e91e7ba977602a54899333bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5931
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank