Protein

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Genbank accession
WID30644.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYYNGSAATFADLKTAIENACVANGWTLSNGILSKNGCFFQLVATTPQLTLQGGTGQTGSTLNGGPSSFVKVMSPTGTPIVFPVNYEIHVMTSPEDEVYCVINYNADFYQQLSFGKSLISGIGGTGAWFTGSYDSRVGQSGSGNQFDMNSGSNMDSGGTRGFWGLAGGLFFESLSGGSYSGNYFHCGLDAVNWYNTRGSNLGYPHCAAIINALPNQSNSATVLVPVKGIKTRGSGGLTIVVNPPSVRYCRIDNLEPGSLVTYGPDQWKVYPFYRKDLTQRQGSSSSIHSGTYGYAIKYTGS
Physico‐chemical
properties
protein length:302 AA
molecular weight: 32070,31780 Da
isoelectric point:7,57359
aromaticity:0,12252
hydropathy:-0,17583

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WID30644.1
1 302
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3449
Central domain 11 203 194 0,0039
C-terminal 204 302 98 0,9992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-203
C-terminal
204-302

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HMGUpa1
[NCBI] 		3028473 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa DSM 50071
[NCBI] 		1123015 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas aeruginosa

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WID30644.1 [NCBI]
Genbank nucleotide accession
OQ338182 [NCBI]
CDS location
range 8074 -> 8982
strand +
CDS
ATGGCCTACTATAACGGAAGTGCCGCGACTTTCGCGGATTTGAAAACCGCTATCGAAAACGCTTGCGTCGCTAACGGCTGGACGCTTTCTAACGGCATTCTTTCGAAGAACGGTTGTTTTTTCCAACTTGTCGCCACTACGCCACAACTTACGTTGCAAGGCGGAACCGGCCAAACTGGTTCAACCTTGAACGGCGGCCCGTCTAGCTTCGTAAAAGTCATGTCGCCAACTGGAACGCCTATCGTTTTTCCAGTTAACTACGAAATCCATGTAATGACTTCGCCAGAAGACGAAGTTTATTGCGTAATTAACTACAATGCCGATTTTTACCAGCAACTTTCATTCGGAAAGTCGTTGATTTCCGGCATTGGTGGAACTGGCGCATGGTTTACCGGAAGTTATGACAGTCGTGTAGGGCAAAGCGGAAGCGGAAACCAATTCGACATGAATTCCGGCAGTAACATGGATTCTGGCGGAACCCGTGGTTTTTGGGGACTGGCTGGCGGACTTTTCTTCGAATCGTTAAGCGGGGGTAGTTACAGCGGCAATTATTTTCATTGCGGGCTTGACGCTGTAAATTGGTATAACACAAGGGGTTCGAATTTGGGATACCCGCATTGCGCCGCAATCATTAACGCATTGCCAAATCAATCAAATTCGGCAACCGTACTTGTTCCGGTAAAAGGAATAAAAACACGCGGAAGCGGCGGCCTTACTATCGTAGTCAATCCGCCAAGCGTTCGTTATTGCCGAATCGACAACTTGGAACCCGGAAGTTTGGTCACATACGGCCCGGATCAATGGAAGGTTTATCCGTTTTATCGGAAAGACCTTACGCAACGGCAAGGATCGTCAAGTTCTATTCATAGTGGAACTTACGGATACGCTATCAAATACACCGGAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2141ee1d455128edcf1c8ab9e476c6c53a2dc728b9b9d30b464a41dd6e660e1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6691
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Strain-level molecular and infection traits drive phage efficacy against Pseudomonas aeruginosa Winkler,C., Huang,W., Sanders,T., Peng,X., Khan Mirzaei,M. and Deng,L. 1992-07-01 — GenBank