Protein

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Genbank accession
UYA57524.1 [GenBank]
Protein name
collagen-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MSTIKVTNIRDFSGTSGFDLVSGSLSVVGRLQVSNLVINGTISGSTNSVLPSQAGNAGRWLETNGTTATWQTAASTGNILSTQVFTSSGTWTKPAGVRFIHVRVQGGGGGGSGHAESGGAGGYSERIIDVTAVTSVAVTVSGEAGGTYYSGAGGNGGTSSFGSYCSASGGFGANRNNQHSGGLAGVGSGGDLNIYGGGGESHHGRGGNVGGTSHFGGSVAAGHPQGGNFSHNHQSHSAPGSGGAGAHYHSHLGSNGRPGLVVVTHYL
Physico‐chemical
properties
protein length:267 AA
molecular weight: 26116,79970 Da
isoelectric point:8,85887
aromaticity:0,06742
hydropathy:-0,21311

Domains

Domains [InterPro]
DC_0345
STR
2–266
DC_0345
IPR049304
STR
88–265
IPR049304
UYA57524.1
1 267
Architecture
STR
STR 2-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CREM1
[NCBI] 		2982919 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0101
[NCBI] 		232348 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYA57524.1 [NCBI]
Genbank nucleotide accession
OP535465 [NCBI]
CDS location
range 55301 -> 56104
strand +
CDS
ATGAGTACTATTAAAGTAACAAATATTAGAGATTTTAGTGGAACTAGTGGATTTGATCTAGTTTCTGGTTCTCTTTCTGTTGTAGGAAGACTTCAAGTTAGTAATCTAGTCATTAATGGAACGATTAGTGGTAGTACTAATTCTGTTCTTCCATCTCAAGCAGGAAATGCAGGAAGATGGTTAGAAACTAACGGAACTACTGCTACATGGCAGACTGCAGCAAGTACAGGAAATATTTTAAGTACACAAGTTTTTACATCATCTGGTACTTGGACTAAACCAGCAGGAGTTCGCTTTATTCATGTTAGAGTTCAAGGTGGTGGCGGCGGAGGATCCGGCCATGCTGAATCTGGTGGTGCTGGTGGTTATTCAGAAAGAATCATTGACGTAACTGCAGTTACATCAGTTGCAGTAACAGTTTCTGGTGAAGCAGGAGGTACTTATTATTCTGGTGCTGGTGGAAACGGAGGAACTTCATCTTTTGGTTCCTATTGTTCTGCTTCTGGCGGTTTTGGTGCCAATAGAAACAATCAACACTCTGGAGGTCTTGCTGGAGTAGGATCTGGAGGAGATCTAAATATTTACGGTGGCGGGGGCGAATCACATCATGGTAGAGGTGGAAACGTAGGAGGAACTTCTCATTTTGGTGGGTCTGTAGCAGCAGGACATCCTCAAGGTGGTAACTTTAGTCATAACCACCAGTCTCACTCTGCTCCAGGATCAGGTGGTGCAGGTGCTCACTACCACAGTCATTTGGGTTCTAATGGAAGACCTGGACTTGTAGTTGTAACTCATTACTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1c3b7ff952e7851b5b05e02bb931872662ecc44b366c9ab02267ecaa8ca0d57
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50