Protein

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Genbank accession
XYM58933.1 [GenBank]
Protein name
tail sheath
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSLNLVSPGVRVREVDLTIGRIDDINDQVGAIAGPFQKGPVNTPILIETENDLLQTFGKPLSTDSQYEYWMSASSYLSYGGILRVIRSSHTDDTSPLSNANVSVDGGTLTSLQVDSSEDYYNNHLNDITWMYASRNPGSWANDLKVCTIDSKADQRLAIGTDGLAVGYAITAGFTTSVANTDGTIGIQTGYLKAVITDIHDSSVDVKILSEHNVTTDVWSEVDYQEGSSTKSFSGYDEGVDTFNLETPGGALRNNSNLYRAFDNAGAEVQLERTRFQAVVGLGSTEITFGDDLNTLKASIGDQIKSVNGTYTGNIVGFSPEGSDGQYIIMDTATSVAFANTDFIVKSGIGSGLILRQGNTAEDWYNQQTLGLDNQKIFWKSLAERPGTSAYAADRSSRFDEVHIVIVDDTGKVTGSAGNIVEKWVGLSKASDAKISPSADIYYKNYIAQYSSNIFVGAAQTGTGLKYTMLSGYTIDNSGTWGQLTQGVSFNGSGPQTYSLSGGSDYGGVGVYKCKLSDVVSSYSILDNPAEYSVNYIIQGPSSGDTVFSAQAKANKLIQIAETRKDCVACISPYKPDVVGVTQSDTQTTNIINFYDSLTSSSYAVFDSGYKYTFDRFNNTFRYVALNADIAGLMARTSINSFPWFSPAGSQRGSINNAIKLAYNPSQAQRDLLYPKRINPVIFSPGAGMILYGDKTALKESSAFDRINVRRLFLTIEQTIERAARAQLFEFNDILTRTNFLNVVEPYLRDVKAKRGIIDFVVICDESNNTPDVIDSNQFKADIFIKPNRSINFIGLTFVATRSGVSFDEVVGNV
Physico‐chemical
properties
protein length:814 AA
molecular weight: 88408,11270 Da
isoelectric point:4,75296
aromaticity:0,10074
hydropathy:-0,21413

Domains

Domains [InterPro]
G3DSA:3.40.50.11780
STR
28–135
G3DSA:3.40.50.11780 DC_1098 IPR035089 IPR020287
G3DSA:3.40.50.11780
STR
474–665
G3DSA:3.40.50.11780
IPR052042
Unmapped
554–797
IPR052042
XYM58933.1
1 814
Architecture
STR
TAS
TAS
STR 28-665 | TAS 666-697 | TAS 701-800 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM58933.1
1 814
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,6031
Central domain 184 425 243 0,5510
C-terminal 426 814 388 0,2788
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-425
C-terminal
426-814

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-FS3
[NCBI] 		3413219 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM58933.1 [NCBI]
Genbank nucleotide accession
PV340856 [NCBI]
CDS location
range 114367 -> 116811
strand +
CDS
ATGTCATTAAATTTAGTCTCCCCAGGCGTAAGAGTAAGAGAAGTTGACTTAACTATTGGACGTATTGATGATATTAATGATCAAGTAGGTGCTATCGCTGGACCATTTCAAAAGGGTCCCGTAAATACACCAATCTTAATTGAAACCGAAAACGATCTTTTACAAACGTTTGGTAAGCCACTATCTACTGATTCTCAGTATGAATACTGGATGAGTGCATCCTCATATCTCTCATATGGTGGTATATTGAGAGTTATCAGATCTTCGCATACGGATGATACATCTCCATTATCCAATGCTAACGTCTCTGTCGATGGTGGAACTCTAACGAGTTTACAAGTTGATTCCTCAGAGGACTATTACAACAACCATTTAAATGATATTACTTGGATGTATGCATCCAGAAACCCAGGATCTTGGGCTAATGACTTGAAGGTTTGTACTATTGACTCCAAAGCAGATCAGAGACTGGCAATTGGAACGGATGGTCTTGCCGTAGGATATGCGATCACGGCTGGATTTACAACTTCTGTAGCAAATACGGATGGAACTATTGGTATTCAAACAGGATATCTTAAAGCAGTTATTACTGACATTCATGATTCGTCTGTTGATGTCAAAATTTTGTCCGAACATAACGTAACAACTGATGTTTGGAGTGAAGTTGACTATCAAGAGGGCAGTTCTACTAAATCTTTCTCAGGATATGATGAGGGAGTAGACACATTTAATCTTGAAACTCCAGGTGGGGCACTCCGAAATAACTCAAATTTATATAGGGCTTTTGATAATGCTGGGGCAGAAGTTCAACTTGAAAGAACAAGATTCCAAGCCGTTGTTGGTTTAGGATCTACAGAGATTACTTTTGGTGATGATCTAAACACTCTAAAGGCTAGTATCGGTGATCAGATTAAATCTGTTAATGGTACTTATACTGGTAACATTGTTGGATTCTCTCCAGAAGGATCTGATGGACAGTACATTATCATGGACACTGCTACTTCTGTTGCATTTGCAAATACAGACTTTATTGTTAAGAGTGGAATTGGTAGTGGATTAATACTCAGACAAGGCAATACTGCGGAAGACTGGTATAATCAACAGACTCTTGGTTTAGACAATCAAAAAATCTTCTGGAAATCTCTTGCGGAAAGACCAGGAACGTCTGCATATGCTGCAGATAGAAGTTCTAGATTTGACGAGGTTCATATTGTTATCGTTGACGACACTGGTAAAGTAACTGGTAGTGCAGGAAACATTGTAGAGAAGTGGGTTGGTCTTTCTAAGGCATCGGATGCCAAGATTTCTCCATCTGCGGACATATACTATAAGAACTACATTGCACAGTATTCATCAAACATTTTTGTTGGTGCGGCACAAACTGGTACTGGGTTAAAATACACAATGCTCAGTGGATATACAATTGATAATAGTGGTACATGGGGTCAACTCACTCAAGGAGTTTCTTTTAATGGATCTGGACCTCAAACATATTCATTATCTGGAGGTAGTGATTATGGTGGTGTTGGAGTTTACAAGTGCAAACTTTCTGATGTTGTTTCCTCATATTCCATCTTAGATAACCCCGCAGAATACTCGGTTAACTACATTATTCAAGGTCCATCTTCAGGCGATACTGTTTTTTCTGCACAAGCTAAGGCAAATAAACTGATTCAGATTGCGGAAACTCGTAAAGATTGTGTTGCTTGTATTTCGCCATACAAGCCTGATGTTGTTGGAGTTACTCAGTCAGATACACAGACAACAAACATTATCAATTTCTATGATAGTTTGACATCTAGTTCTTACGCTGTATTTGATTCTGGATACAAGTACACCTTTGATAGATTCAACAATACATTCAGATATGTTGCTTTGAATGCCGACATTGCTGGTTTGATGGCAAGAACTTCTATTAATTCTTTCCCCTGGTTCTCACCTGCAGGATCTCAAAGAGGATCCATCAATAATGCAATTAAACTTGCTTATAATCCATCACAGGCACAAAGAGATCTGCTTTATCCTAAGAGAATTAACCCAGTTATATTCTCTCCTGGTGCAGGAATGATTCTATATGGAGACAAAACTGCTCTTAAGGAATCATCTGCATTCGATAGAATTAACGTTCGTCGTCTGTTCCTCACTATTGAACAAACCATTGAAAGAGCTGCAAGAGCACAACTCTTTGAGTTCAATGATATTTTAACAAGAACTAACTTCTTGAATGTCGTTGAACCATATCTCCGCGATGTTAAGGCGAAGAGAGGTATCATTGATTTCGTTGTTATTTGTGACGAATCTAATAACACACCAGATGTTATTGATTCCAATCAGTTTAAAGCTGATATCTTCATAAAACCAAATAGATCAATCAACTTCATTGGACTGACGTTCGTGGCTACACGTTCTGGAGTCAGTTTTGATGAAGTAGTTGGTAATGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d687aa1b4b426b45c4c39ba6eb8036266169ee13af71a87e2bcc01de459f9a56
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8703
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50