Protein

View in Explore
Genbank accession
CAL9969658.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MSTVIKVSNMYGTTLSPDGVESLEIHLTPTLGLDTQVIQDAVDEAEASAAAALVSENNAAASEAAALASENAAAASESAALASENAAATSEANAATSEANALASENAAATSEANAATSESNASDSEAAALASENAAAASEAAALASENAAATSESNAATSETNAANSAAAALASENAADSSETNAANSAAAALASKNAAATSESNAATSESNAATSESNAAASALAASNSEDAAQESETNAAASAASALASKNAAATSESNAATSESNAAGSASSALSSKNAAAASASAAATSEANAAVSETNAANSAQEAADSAAAAASALRPRGDWDASSGNFPIPTLVPDERADFYQISVGGTMTDSNPAQPDVTVAVGDQLYWHLENDIWYKIDNTDQVTSVAGKQGAVVLNKTDVGLNNVDNTSDANKPVSTAQQAALDRLEDDAVVNAGTVDGLNSTQFVRSETNDTVTGELSLTKQTHFTKSQTNGRDFTDASVKVAPSATTNTTGYTTIALGSSTADNYGIGVSAHRKTTSANPDFVITHHNNSASGTEMLRMSDVSFTYKGNRVLTVADEGTGNGLDADTVDGLHASQFIRSDANDTVTGLLSITRPGEMMNFADDSMSSADGWIRLGNGAYDWAIKYVGSSSGTDGNELRFESTGASGTGKYWQMDHDGNFEYYDGSSLQTMWHSGNDGSGSGLDADKLDGLQSTSFARSDATDTISGSWTFTNDVTISKTNGRLVFDETAYATGNSGIDFLTGTDQNASLIHEISDSDLQGSYNGQVLKLIDISAAASIVGLEVDGDIYARNSQIVWHAGNDGAGSGLDADTVDGKHASDFATDDHTHDGRYARTFLLGNTGTGTGWRRVGKFTGAPNDRMHIKIAGKNSYASLSPAVEGLQESAEFNWTWGNATSGTLDAVVSCFVTAFANTPTVLTGAKIVQTATSQAELWIQHGTYHDIQVTLSSQSSNIIAIGGNNSQAEPTASVEQLLTLNHYWHSGHDGSGSGLDADLLDGIHASSFVRSDQADNINARHRYTNTDSVKLPAGSIAQRTSSPEVGDIRFNTQDDGFEGYNSRGWGSIGGGGVPEYSVLFGANRYSFSGGSNYILINSGTSALAGDYVSFMHKFPTSAAFEDRTLLAPGTIGDKHVWYNGGALRIDPDVDMTVTLDGEVVTDGYTLPTDGVDRLLKIVFNESSAIAYIGGATGGTETVHGPIYNITIDIGGSMSFFPVNEGWTSATASIIDENSNRTATGYNFTSSAWWGENDTSIDNGSGLLIETADGIEKEVELPSGVQPGDWFSIGQYGKALGTIRLTDSVYPIMGLFEDFIMDVDYQVFTFSYVDPITGWKIVNAVGESEAPSAAKTVVEGTYAEGTDTFSITYDIGYVDVFVGGYKLANTEFNAADGATVVLNNPLLRESYVYIQGWNHITVSETSAGVVSYDDSNSDVSVDTVQAALDIVTKKSELLDKVLTEYANPNIFINGDFSVDQRNLHTTVSLTSGTTLYQDRWVYRGTNGTGGSANVGFGGNVGGTYSYVTHTGATSNGYLAQKVEVNDVEVYSGKTLTLSTRARFDFTQECDVTCYWALVNTWAAISDVVKTPMTVTDVKGDTSATFTVPEFTHTWSPSEQYILVVRVDYSKEGVATPDGTYRFYNMKLEKGDVATPFIPDDYATNLHKCQYYYWNVKKGGSSLYAMVYDGSSDGSTQNKELIFDVTRMRGGLQDNGTVNIVVSYVNGTAPVESANHGGQWRMYWSGVPNTDVRGVSTLQFAAEL
Physico‐chemical
properties
protein length:1764 AA
molecular weight: 184516,46590 Da
isoelectric point:4,31342
aromaticity:0,08050
hydropathy:-0,27925

Domains

Domains [InterPro]
DC_0401
STR
6–127
DC_0401 DC_0401 DC_0836 DC_1600 DC_1600 DC_0568
DC_0390
STR
232–401
DC_0390 DC_1600
CAL9969658.1
1 1764
Architecture
STR
STR
STR
STR
STR 6-127 | STR 159-518 | STR 627-1154 | STR 1341-1764
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9969658.1
1 1764
Domain Start End Length (AA) Confidence
N-terminal 1 1075 1075 0,4978
Central domain 1076 1294 220 0,7947
C-terminal 1295 1764 469 0,5932
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1075
Central
1076-1294
C-terminal
1295-1764

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D260
[NCBI] 		3105016 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9969658.1 [NCBI]
Genbank nucleotide accession
OZ195864.1 [NCBI]
CDS location
range 20347 -> 25641
strand +
CDS
ATGTCAACAGTAATTAAAGTAAGTAACATGTATGGAACTACTCTATCCCCTGATGGGGTAGAGAGTTTAGAAATACACCTAACTCCTACATTGGGGTTAGATACCCAAGTTATACAAGATGCAGTAGATGAGGCAGAGGCTTCCGCAGCAGCAGCTCTTGTATCCGAAAATAATGCAGCAGCAAGTGAAGCAGCGGCTCTGGCATCCGAGAATGCAGCGGCGGCAAGTGAATCAGCAGCTCTTGCATCTGAAAATGCGGCAGCGACTTCAGAAGCTAATGCAGCAACAAGCGAAGCCAACGCCCTTGCATCAGAGAACGCAGCGGCAACTTCTGAGGCTAATGCGGCGACAAGCGAATCTAATGCTTCAGACAGTGAAGCGGCAGCTCTTGCATCCGAAAATGCGGCAGCAGCAAGCGAAGCGGCAGCTCTTGCATCAGAAAATGCAGCAGCAACAAGCGAATCCAATGCAGCTACTTCCGAAACTAATGCAGCGAACAGTGCAGCAGCAGCTCTTGCATCCGAAAATGCAGCTGATAGTTCAGAAACTAACGCAGCTAATAGTGCAGCAGCAGCTCTTGCCTCCAAAAATGCAGCAGCAACTTCCGAGTCTAACGCAGCAACTTCCGAGTCTAACGCAGCAACTTCCGAGTCTAACGCAGCAGCGTCAGCACTAGCAGCAAGCAACTCTGAAGATGCAGCTCAGGAGAGCGAAACTAACGCAGCAGCATCTGCAGCATCAGCACTAGCATCTAAGAATGCAGCGGCAACTTCTGAATCAAATGCAGCTACCTCAGAGTCAAATGCAGCAGGCAGTGCATCAAGTGCTCTGTCTTCCAAGAATGCAGCCGCAGCAAGTGCTTCTGCAGCAGCTACAAGTGAAGCTAACGCGGCAGTAAGTGAAACAAATGCAGCTAACAGTGCTCAAGAAGCAGCAGATAGCGCAGCGGCGGCAGCCTCTGCACTACGTCCACGTGGTGATTGGGATGCTTCTAGTGGTAATTTCCCTATACCAACTCTAGTTCCAGACGAGAGAGCTGACTTCTACCAAATCAGTGTTGGCGGAACAATGACTGATTCTAATCCAGCACAGCCAGATGTTACTGTGGCAGTTGGTGACCAACTATACTGGCACTTAGAAAATGATATCTGGTACAAAATAGACAACACCGACCAAGTTACCTCAGTAGCTGGTAAGCAAGGTGCTGTTGTGCTTAACAAGACAGATGTTGGGCTAAATAACGTGGATAATACATCTGATGCTAATAAACCAGTATCCACAGCACAGCAAGCTGCACTAGATCGCCTAGAAGATGATGCTGTAGTAAATGCAGGTACAGTAGACGGACTTAACTCAACACAGTTCGTACGCTCAGAAACTAACGATACTGTTACTGGAGAACTTAGCTTAACGAAGCAGACACACTTCACTAAATCACAGACTAATGGTCGTGATTTTACTGATGCTTCTGTAAAAGTAGCACCTTCTGCGACCACAAATACCACAGGGTACACAACAATCGCTCTAGGATCTTCTACTGCAGATAACTACGGTATTGGAGTAAGTGCTCACCGTAAAACTACCAGTGCTAATCCTGACTTCGTTATCACGCACCACAATAACAGTGCCTCAGGTACCGAAATGCTTCGTATGTCAGACGTTTCATTTACTTACAAAGGTAATCGTGTACTTACTGTAGCTGACGAAGGTACTGGAAATGGTCTAGATGCAGATACTGTTGATGGACTACACGCCTCTCAGTTTATCCGTTCTGATGCTAATGACACCGTTACTGGATTGCTTAGTATAACGCGTCCTGGCGAGATGATGAATTTTGCTGACGATAGCATGAGTAGCGCGGATGGTTGGATTCGATTAGGTAATGGCGCCTATGATTGGGCTATTAAGTACGTAGGTTCCTCATCTGGAACAGACGGAAACGAACTTAGATTTGAAAGTACTGGAGCTAGTGGCACTGGAAAATACTGGCAAATGGACCATGACGGGAACTTCGAATACTACGATGGCTCTTCGCTACAAACCATGTGGCATTCTGGTAACGACGGTTCTGGTTCTGGACTAGATGCTGACAAATTAGATGGGTTACAATCCACTTCTTTTGCTAGGTCAGATGCTACGGATACAATCTCTGGTTCATGGACTTTTACAAATGATGTAACGATTAGTAAAACTAATGGACGTCTAGTCTTTGATGAGACAGCGTATGCTACCGGTAATTCAGGAATAGATTTCCTGACCGGCACTGATCAAAATGCCAGTCTTATACACGAAATAAGTGATTCGGACCTTCAGGGATCATATAATGGTCAGGTACTTAAGCTAATTGATATAAGTGCCGCAGCTTCTATAGTAGGTCTTGAAGTAGATGGCGATATATACGCCAGAAACTCACAAATAGTATGGCACGCAGGTAACGATGGTGCAGGTTCTGGACTAGATGCAGATACTGTAGATGGTAAGCACGCATCAGATTTCGCAACGGACGACCATACACACGATGGAAGGTACGCTAGAACGTTTCTTCTAGGAAATACTGGTACTGGTACCGGCTGGAGAAGAGTAGGTAAGTTTACTGGTGCTCCCAACGATCGTATGCATATCAAAATTGCTGGTAAAAACAGTTACGCATCCCTTTCTCCTGCCGTTGAAGGACTACAGGAAAGTGCGGAATTTAACTGGACTTGGGGTAATGCAACTTCAGGTACTCTGGATGCTGTAGTTTCTTGTTTTGTTACTGCCTTTGCTAATACACCCACAGTACTTACTGGTGCTAAGATCGTGCAGACAGCGACCTCTCAGGCAGAGCTTTGGATTCAACACGGAACTTACCACGATATCCAGGTTACCTTATCTAGTCAGTCTAGTAATATAATCGCCATTGGAGGTAACAATAGTCAGGCAGAACCTACCGCTAGTGTCGAGCAGCTACTAACACTGAACCACTACTGGCACTCCGGTCACGATGGTTCCGGCTCAGGATTAGACGCGGACCTGCTAGATGGCATACACGCTTCTTCTTTCGTTAGATCTGACCAAGCGGATAACATCAACGCGAGACACCGCTACACCAACACGGACAGTGTGAAACTTCCTGCAGGCTCTATAGCGCAGAGAACAAGCTCACCGGAAGTTGGTGACATTAGGTTCAACACCCAGGATGATGGCTTTGAAGGCTACAACTCTCGTGGTTGGGGATCAATCGGTGGTGGTGGCGTTCCAGAATACTCTGTATTATTTGGGGCTAACCGTTACTCATTCTCTGGTGGATCAAACTACATTCTTATCAATAGTGGAACATCTGCACTGGCTGGAGATTACGTTTCCTTCATGCATAAATTCCCTACCTCAGCAGCTTTTGAGGACAGAACTCTACTAGCTCCTGGAACTATTGGCGATAAGCATGTATGGTATAATGGTGGAGCACTACGTATCGACCCAGATGTTGATATGACCGTTACTCTTGACGGAGAGGTAGTAACAGACGGATACACACTACCTACGGATGGTGTTGACCGTCTATTAAAAATAGTGTTCAACGAATCTTCTGCAATAGCCTATATTGGTGGCGCTACTGGAGGAACTGAGACTGTTCATGGACCTATCTATAACATTACAATAGATATTGGCGGTTCTATGTCCTTCTTCCCAGTGAATGAGGGTTGGACTTCTGCTACTGCAAGCATCATTGATGAAAACTCCAACAGAACAGCAACAGGTTACAACTTCACTAGCTCTGCTTGGTGGGGTGAGAACGATACTTCGATTGATAATGGCTCAGGCTTATTAATTGAAACAGCCGATGGTATAGAGAAAGAAGTAGAGCTACCTTCTGGTGTACAGCCGGGAGATTGGTTCTCTATAGGTCAATATGGAAAGGCTCTAGGTACTATTAGACTAACCGACTCAGTTTACCCTATTATGGGACTGTTTGAAGACTTCATCATGGATGTGGACTATCAAGTATTTACCTTCAGTTACGTTGACCCAATTACTGGTTGGAAAATTGTTAACGCAGTTGGTGAATCAGAAGCTCCTAGTGCTGCCAAGACTGTAGTAGAAGGTACTTACGCAGAAGGGACTGATACGTTCTCGATTACATACGACATAGGTTACGTGGATGTGTTTGTTGGCGGTTACAAACTAGCCAACACAGAATTTAACGCTGCGGATGGTGCGACTGTCGTTCTAAACAATCCACTACTTCGTGAGTCTTACGTATATATTCAGGGATGGAATCATATAACAGTTAGTGAAACATCTGCTGGTGTAGTGTCCTATGATGATTCTAACAGTGATGTTAGCGTAGATACAGTACAAGCCGCTTTGGACATCGTAACTAAGAAATCTGAGTTACTGGATAAGGTACTTACTGAGTACGCTAACCCTAACATATTCATTAACGGTGACTTTAGCGTAGACCAAAGAAACCTACATACTACAGTCTCACTTACTTCAGGAACTACACTGTATCAAGATCGCTGGGTGTACCGTGGAACTAATGGCACAGGGGGATCGGCTAATGTTGGTTTTGGGGGTAATGTAGGGGGCACATACAGTTATGTGACACACACAGGAGCTACTAGCAATGGGTATTTGGCTCAGAAAGTAGAAGTCAATGATGTAGAGGTGTACTCAGGAAAAACACTAACTCTGTCTACTAGAGCGCGATTTGACTTCACGCAGGAATGTGACGTAACTTGCTACTGGGCACTGGTAAATACCTGGGCTGCTATCTCAGATGTGGTAAAAACGCCTATGACTGTTACTGACGTTAAAGGAGATACCTCTGCTACATTCACAGTTCCAGAGTTTACACACACTTGGAGCCCTTCCGAGCAGTACATCCTGGTTGTACGAGTAGACTACTCTAAAGAGGGGGTGGCTACCCCAGATGGTACTTACCGATTCTATAATATGAAGTTGGAAAAAGGTGACGTGGCAACTCCTTTCATACCTGATGACTACGCCACTAACTTACACAAGTGCCAGTACTACTACTGGAATGTTAAAAAGGGAGGATCCTCATTATACGCTATGGTTTATGATGGTAGTTCAGATGGTTCTACACAGAATAAAGAGTTAATCTTTGATGTAACTCGAATGCGTGGAGGATTACAGGATAATGGTACAGTAAATATCGTGGTATCTTATGTGAACGGAACAGCTCCAGTAGAGAGTGCCAACCACGGTGGTCAATGGAGAATGTACTGGTCTGGTGTGCCAAACACGGATGTTCGTGGTGTATCTACACTACAGTTCGCGGCAGAACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a1d41ea65e1a843c3ee8a32809e6d8b4401d6fa4cb21f8167e8eb41e1448b21
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4754
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50