Protein

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Genbank accession
QGZ18018.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQIDKPNLHFRTKLYAGTGSANSITYDESGNMQPDLMWIKSRGHTASWLCNDVVRGVTKRLKLDANSAESTETQMITSFDTNGFSLGTSTTANQNTTDFASYSWKANGAGSSNSDGSTTSTVSVNTASGCSIVQYAGSSSAATIGHGLGAAPNMIIVKTYSSGYEWAVYHKNLGHGENLYLDSTGAASSTTTFWNNTAPTSSVFSTGGQIIYTNYSGQNYIAYCFTEKKGFSRFGLYSGNANADGTFVYCGFKPAWILRKCVTGGTAENWVINDIKRDTYNQSQKALFPNNVNVEDTATHNAVDFLSNGFKCRTADGRTNGTSKNYIYAAFAENPIVGSNNIPATAK
Physico‐chemical
properties
protein length:348 AA
molecular weight: 37327,58700 Da
isoelectric point:8,11046
aromaticity:0,11207
hydropathy:-0,40431

Domains

Domains [InterPro]
IPR055906
STR
6–336
IPR055906
QGZ18018.1
1 348
Architecture
STR
STR 6-336 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ18018.1
1 348
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0027
Central domain 11 209 200 0,0006
C-terminal 210 348 138 0,9994
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-348

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC104P
[NCBI] 		2686459 No lineage information
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18018.1 [NCBI]
Genbank nucleotide accession
MN698243 [NCBI]
CDS location
range 31260 -> 32306
strand -
CDS
ATGGCACAGATAGATAAACCAAATTTACATTTTAGAACAAAACTTTACGCAGGTACTGGTTCAGCTAATTCTATTACTTATGATGAAAGTGGAAATATGCAACCTGATTTAATGTGGATAAAATCCAGAGGACATACTGCAAGTTGGCTTTGTAATGATGTTGTTAGAGGTGTAACTAAAAGATTAAAATTAGATGCGAATAGTGCAGAAAGCACAGAAACACAAATGATAACATCATTTGATACAAATGGTTTTTCATTAGGTACATCAACTACAGCAAATCAAAATACAACTGATTTTGCTTCATACAGTTGGAAAGCAAATGGTGCAGGTTCATCTAATTCAGATGGTTCTACAACATCAACTGTTTCAGTAAACACAGCATCAGGATGTTCAATAGTTCAATATGCTGGTTCTAGTTCTGCAGCAACTATAGGTCATGGTTTAGGAGCTGCACCAAATATGATAATAGTTAAAACATATAGTTCTGGTTATGAATGGGCAGTTTATCATAAAAATTTAGGTCATGGTGAAAATTTATATTTAGATAGTACAGGTGCTGCATCATCAACAACTACATTTTGGAATAATACTGCACCAACAAGCTCTGTATTTAGTACTGGTGGACAAATAATTTATACTAATTACTCTGGTCAAAATTATATTGCTTACTGTTTTACAGAAAAAAAAGGTTTTTCTAGATTTGGTTTATATTCTGGTAATGCTAATGCAGATGGTACATTTGTATATTGTGGATTTAAACCTGCTTGGATTTTAAGAAAATGTGTAACAGGTGGTACAGCAGAAAATTGGGTTATAAATGACATTAAAAGAGATACATATAATCAAAGTCAAAAAGCTTTATTTCCTAATAATGTTAATGTTGAAGATACTGCAACACACAATGCAGTAGATTTTTTATCTAATGGTTTTAAATGTAGAACAGCAGATGGAAGAACTAATGGTACGAGTAAAAATTATATTTATGCAGCATTTGCAGAAAATCCTATAGTAGGAAGTAATAATATTCCAGCTACTGCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1073b0893d46679acfbac0f255db08a8ab84c251709bd0a1114fc7e8a494570a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9280
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank