Protein

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Genbank accession
XHH73963.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MILENACEHKDFLGSLFDELGFNGGFEVIGNAIHFNIVSDKEKPTKEQVLEKLKEITLKKKKQEIETKINAICKEKIINEFRSEVLGSLHAYNLTLEDQMNLCALVIAGIDSFFRCAEVINGVTQN
Physico‐chemical
properties
protein length:126 AA
molecular weight: 14217,25300 Da
isoelectric point:5,22910
aromaticity:0,07143
hydropathy:-0,12540

Domains

Domains [InterPro]
DC_0271
STR
1–126
DC_0271
Coil
Unmapped
46–66
Coil
XHH73963.1
1 126
Architecture
STR
STR 1-126
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11538AIC_1
[NCBI] 		3331680 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73963.1 [NCBI]
Genbank nucleotide accession
PQ159905.1 [NCBI]
CDS location
range 2966 -> 3346
strand -
CDS
ATGATTTTAGAAAACGCATGCGAGCATAAGGATTTTTTAGGAAGCCTTTTTGATGAGTTAGGATTTAATGGTGGTTTTGAAGTTATTGGTAACGCTATACACTTTAACATCGTAAGCGACAAAGAAAAACCGACTAAAGAGCAGGTTTTAGAAAAACTCAAAGAAATCACGCTTAAAAAGAAAAAGCAAGAAATAGAAACCAAAATTAACGCTATCTGTAAAGAAAAAATCATTAACGAGTTTAGAAGCGAGGTTTTAGGTAGTTTGCATGCGTATAATTTGACTTTGGAAGATCAAATGAACTTATGTGCTTTAGTGATAGCGGGCATTGATTCGTTTTTTAGGTGCGCTGAAGTAATTAACGGCGTTACCCAAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b0fd6544e6c738bb20a91b6c5361d7e512874ce4fddff3c1c9468ba7c66480be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5616
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank