Protein

View in Explore
Genbank accession
QDH49254.1 [GenBank]
Protein name
long tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTSKSFRATAGLDAAGEKIINVGKASRSIGSDGVNVDFFNEFNTVQQYDSTRGYAANMAIIYARRLWYSRAEIASPAGAFDETKWFATRNDPKWLYNNLTSNDGQVLESGTYLMADGRFSELTYLLPDSPVEGDIVTIKDGGGQAGINSILVRSNTRQIRLRESQSTSYRLTHPYMTVAFIFNGNLWRISETLDNRDSQVVNATGAGSFQLQAGMTTFRNSNTGKITIQLPKYANDGDTIETYDMDRMSSVNAVTLKIYPGSGHTIAYDGQTSAESVVSQRSGYGVFIFDGSSNRWNIYDNDNRIRLRRISDDLSMLPNDYIFVTGPTSGGLRDVTMTLPSDVADGDRVMISLYMMAKNQNATIKVKDDSGEKIRTNKNMMQFPQRKDYPPDQWFSVSSLAFSANTDYLPYMELSYQKATKEWVVADYRPILERVDPTNRSRLGVIALASQAEVNKNLEDTPSDETAITPSTLANKTATETRRGIIRLGTTAEVNQDSTASYRDDVAVTPKKLNEFTATETRRGVAEIATQFEVNTGTDDTTIVTPKKLDSRNASETLTGIAKLVKTGSTTAGGASRGDAGTNVYNYANNTDIVTPKSLDEKTATEKMKGLVVLATENEVIAGSSSTSAMPTVVTPVQLHKKTATEERIGFIEIATQQETDQGVDNERAITPKKLNGRNATETLTGIMALATTSEIAAGTVTNKAITPVKLKEYFNTVGHVSVSATDGLTQVGTIWDTISIGISSATETQRGTLRVATQGETNTGQADDVYVTPKKLQAKKATDTAEGIIRCATNTEAAAGTLSNVAITPATMNYLNGNDPSWGATTQRRGATFITTQSNTFIGNSTVGSTQPVDQYLEDFYSVSPRGLNFALQNFLPLKATAVNSDKLGNVVADSWMRRDADQTVSGANTYTKLQTMTGRIAVTGGGAVESTIDRLRIVNQKSGSAAFIVGTDGVAGASSIALNAGTGTSSVAKNNWEIIASGGTGSRIGATEMSLTTGTMDTLIATSSGDIRVARDATVARNLMVGGKVVVSGLDAIYANNTAFTFGNSQRDSQILTTSASGWDGLTVSNDAGTTTAVVMNERNYNRFVDVTHVKKAGDSMTGAFAVLMIGNAVRLAANGTSGFIQAGSPTDPSKQSMQLTGQGNLNLTEFNVKIANYAQAKINGFPIYHEGNRPTPADIGAVALSGSVVDELTVRNSIKIGNVRITANPDTKTCEFTWEP
Physico‐chemical
properties
protein length:1223 AA
molecular weight: 131286,74770 Da
isoelectric point:5,64374
aromaticity:0,06787
hydropathy:-0,33671

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH49254.1
1 1223
Domain Start End Length (AA) Confidence
N-terminal 1 351 351 0,7438
Central domain 352 705 355 0,1094
C-terminal 706 1223 517 0,5549
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-351
Central
352-705
C-terminal
706-1223

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Phynn
[NCBI] 		2589666 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH49254.1 [NCBI]
Genbank nucleotide accession
MN038175.1 [NCBI]
CDS location
range 35924 -> 39595
strand +
CDS
ATGACTTCTAAATCCTTCCGCGCCACAGCAGGGCTAGACGCCGCTGGCGAGAAAATTATTAATGTTGGTAAAGCTTCTCGCTCTATTGGTAGCGACGGGGTCAACGTTGACTTTTTTAATGAATTTAACACGGTTCAGCAGTACGATAGCACGCGTGGTTACGCTGCTAACATGGCGATCATCTATGCGCGTCGTCTGTGGTACTCCCGTGCAGAAATTGCATCTCCTGCAGGTGCTTTCGACGAAACAAAATGGTTTGCTACTCGTAATGACCCGAAATGGTTATACAACAACCTGACCAGCAATGACGGACAGGTACTGGAATCCGGTACATACCTGATGGCGGACGGTCGCTTCTCTGAACTGACTTATCTTCTGCCAGATTCCCCGGTTGAAGGCGATATCGTGACCATCAAAGACGGTGGCGGTCAGGCTGGTATTAACAGTATTCTGGTGCGTTCAAATACCCGACAGATCCGTCTGCGTGAGTCTCAGTCTACCTCGTATCGTCTGACTCACCCATACATGACCGTTGCTTTCATCTTTAACGGAAACCTATGGCGTATTTCCGAGACTCTTGACAACCGGGATTCTCAGGTCGTTAATGCGACGGGTGCGGGTTCTTTCCAGCTCCAGGCGGGTATGACTACATTCCGCAACAGCAACACAGGTAAGATTACCATCCAGTTACCGAAATATGCAAACGACGGAGATACAATCGAAACCTACGACATGGATCGTATGTCTTCTGTCAATGCGGTTACTCTGAAGATTTATCCGGGTAGTGGTCACACTATCGCTTATGATGGTCAGACTTCAGCGGAAAGCGTAGTTAGTCAGCGTTCGGGCTATGGCGTGTTTATCTTTGACGGATCTAGTAACCGCTGGAACATCTACGATAACGATAACCGTATTCGCCTGCGTCGTATCAGTGATGATCTGTCTATGCTGCCAAATGATTACATTTTCGTGACCGGTCCTACTTCTGGCGGTCTGCGTGATGTAACAATGACTCTTCCGTCTGACGTTGCTGACGGTGACCGGGTAATGATTTCTCTTTACATGATGGCGAAGAACCAGAACGCGACCATCAAAGTTAAAGATGATTCTGGTGAGAAGATCCGCACCAATAAGAATATGATGCAGTTTCCACAGCGTAAGGACTATCCGCCTGATCAGTGGTTCAGCGTAAGCTCCCTGGCTTTTAGTGCAAACACCGACTATCTGCCATACATGGAACTGTCTTATCAGAAAGCTACTAAGGAATGGGTTGTAGCGGACTATCGCCCTATTCTGGAACGCGTGGATCCGACTAATCGTAGTCGTCTGGGTGTTATTGCGCTTGCTTCTCAGGCAGAGGTAAACAAGAACCTGGAAGATACTCCGAGCGACGAAACCGCGATCACTCCGTCAACCCTGGCAAACAAGACCGCAACGGAAACCCGTCGTGGTATTATCCGACTGGGAACCACCGCAGAGGTGAATCAGGATTCAACCGCTTCTTATCGTGACGATGTGGCTGTTACTCCTAAGAAGCTGAACGAGTTCACCGCAACGGAAACCCGTCGTGGTGTAGCAGAGATCGCGACCCAGTTTGAAGTAAACACAGGAACCGATGATACCACTATCGTAACGCCTAAGAAGCTGGATAGTCGTAATGCAAGCGAAACCCTTACCGGTATCGCAAAACTCGTTAAAACTGGTTCTACGACCGCTGGCGGGGCAAGCCGTGGTGATGCAGGTACTAACGTATACAACTACGCGAACAACACCGATATCGTAACGCCGAAATCTCTTGACGAGAAGACCGCAACCGAGAAAATGAAAGGTCTTGTTGTCCTGGCTACAGAAAATGAGGTGATCGCAGGATCTTCTTCAACTTCTGCTATGCCAACTGTTGTTACTCCGGTTCAGTTGCACAAAAAGACTGCTACCGAAGAGCGTATCGGCTTTATCGAGATCGCAACTCAGCAGGAAACGGATCAGGGTGTCGATAATGAGCGTGCAATCACTCCTAAGAAGCTTAACGGTCGCAATGCTACCGAGACATTAACCGGTATCATGGCGCTCGCTACAACCTCGGAGATTGCTGCAGGCACGGTAACCAATAAAGCGATTACCCCGGTTAAGCTGAAAGAGTACTTTAACACGGTAGGGCATGTTTCGGTTTCTGCTACCGATGGATTGACTCAGGTAGGTACGATCTGGGATACTATTTCGATTGGTATCAGTTCTGCAACGGAAACACAGCGCGGTACTCTGCGTGTTGCGACTCAGGGAGAAACAAACACCGGTCAGGCTGACGATGTTTATGTTACCCCTAAGAAGCTGCAAGCTAAAAAGGCTACTGATACTGCAGAAGGTATCATCCGCTGTGCAACCAACACTGAAGCAGCAGCAGGTACTCTGAGTAACGTCGCGATCACTCCGGCAACGATGAACTATCTGAATGGTAATGATCCTTCGTGGGGTGCTACAACTCAGCGCCGTGGTGCAACATTTATCACGACTCAGAGCAACACGTTTATCGGTAACTCTACTGTTGGTTCAACTCAACCAGTAGATCAGTATCTGGAAGACTTCTATTCGGTATCCCCTCGCGGTCTGAATTTTGCTCTGCAGAATTTCTTACCTCTGAAGGCAACCGCAGTCAACTCGGACAAACTGGGTAATGTAGTTGCTGATTCATGGATGCGTCGTGATGCGGATCAGACAGTTTCTGGTGCAAACACTTACACCAAGTTGCAGACAATGACTGGTCGTATTGCGGTAACGGGTGGTGGTGCAGTAGAAAGCACAATTGATCGTCTTCGTATCGTTAACCAGAAATCAGGAAGCGCTGCTTTCATCGTGGGTACTGACGGGGTAGCAGGAGCAAGCTCAATCGCTCTGAATGCCGGTACAGGTACATCATCAGTTGCTAAAAACAACTGGGAAATCATTGCTTCTGGTGGTACGGGTAGCCGTATCGGTGCAACTGAAATGTCTTTGACTACTGGAACGATGGATACTCTGATCGCGACCAGTTCAGGTGATATTCGTGTTGCGCGTGATGCTACAGTAGCTCGTAACCTCATGGTAGGTGGTAAAGTTGTTGTTTCTGGTCTGGATGCGATTTATGCGAATAACACCGCGTTTACTTTTGGCAACAGCCAGCGCGATTCTCAGATCTTGACAACTTCGGCTTCTGGCTGGGATGGTCTGACCGTTTCTAATGATGCGGGTACTACCACTGCAGTAGTTATGAACGAAAGGAACTACAACCGCTTTGTTGACGTTACTCACGTTAAGAAAGCCGGTGATAGTATGACCGGTGCGTTTGCGGTTCTGATGATCGGCAACGCCGTGCGTCTGGCAGCTAACGGAACCTCTGGATTTATCCAGGCTGGTAGCCCTACAGACCCAAGTAAACAGAGTATGCAGTTAACCGGACAAGGTAACCTTAACCTGACAGAGTTTAACGTGAAAATCGCTAACTATGCACAGGCTAAGATCAACGGATTCCCTATCTATCATGAAGGAAACCGACCAACCCCCGCAGATATTGGTGCTGTTGCTCTTTCTGGTTCTGTTGTTGATGAACTGACTGTCCGCAACTCAATCAAGATTGGTAACGTTCGAATCACTGCAAACCCTGATACCAAAACATGTGAATTTACCTGGGAGCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c057d5b0eec7ce1cf3a960f46e930c70e008f1e8e7e9a1a0651943910f40209
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5754
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50