Protein

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Genbank accession
QQG32134.1 [GenBank]
Protein name
short tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSILSTKAGVKSRLADYLQFETKNSNDVMSKQPYGSITISQLAKGVDYDNVQSAIDDVRNFSIKAINTIEINTDGVSPEGSSQTDTWVFEGTVSNSNGTTDDSMINVFGFNVLVSDSDTADEVADKVKLVLDVAVANNFVINSVVKGANPGELEVNYIDNQTHELSPTYANGIKITQTILSPAKEGYGAWIRIGTKTETLDGAAEPVLLHYFKRIA
Physico‐chemical
properties
protein length:216 AA
molecular weight: 23348,70410 Da
isoelectric point:4,54777
aromaticity:0,07407
hydropathy:-0,20370

Domains

Domains [InterPro]
IPR014791
TAS
1–216
IPR014791
IPR015982
Unmapped
1–62
IPR015982 IPR043180
IPR014791
TAS
5–216
IPR014791
IPR036214
STR
12–216
IPR036214
IPR015976
Unmapped
80–186
IPR015976
QQG32134.1
1 216
Architecture
TAS
STR
TAS 1-11 | STR 12-216
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CkP1
[NCBI] 		2799684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter koseri
[NCBI] 		545 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG32134.1 [NCBI]
Genbank nucleotide accession
MW239124.1 [NCBI]
CDS location
range 90845 -> 91495
strand +
CDS
ATGAGTATTTTAAGCACTAAGGCGGGAGTTAAATCCCGTCTTGCTGATTATCTTCAGTTTGAAACAAAGAATTCAAACGATGTAATGAGCAAACAACCGTATGGTTCAATAACAATTTCTCAATTAGCTAAAGGCGTTGATTATGATAACGTTCAATCAGCAATTGATGATGTACGAAATTTCAGTATAAAGGCAATTAACACTATTGAAATTAATACTGACGGTGTATCACCTGAAGGAAGCTCTCAAACTGACACATGGGTGTTTGAAGGGACAGTATCTAATTCTAACGGAACCACAGACGATTCCATGATAAATGTTTTTGGCTTTAATGTTTTAGTTTCAGATTCAGATACCGCAGATGAAGTTGCCGATAAAGTTAAATTAGTTCTTGACGTAGCAGTTGCAAATAATTTCGTGATTAACTCTGTTGTTAAAGGAGCTAACCCTGGAGAATTAGAGGTTAATTATATTGACAACCAGACTCATGAATTAAGCCCTACTTACGCAAATGGAATAAAAATAACTCAAACTATTTTATCTCCAGCTAAAGAAGGATATGGTGCCTGGATTCGTATCGGAACAAAGACTGAAACACTAGACGGAGCTGCTGAGCCGGTTTTACTTCACTACTTTAAGAGAATAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
88cf336032ae961521a30fc66849ce00dea78d71172c324fd55fe376542b3dd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
CkP1, a S16-like broad-host-range myovirus, recognizes Citrobacter koseri lipopolysaccharide through its long tail fibres Oliveira,H., Santos,S., Pires,D., Pinto,G., Carrera,J., Briers,Y., Schmelcher,M., Dotsch,A. and Azeredo,J. 2022 — GenBank