Protein

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Genbank accession
UYE98982.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MLPFPQLVQYGNVVQTALMDINFNNSSVGSTTVTDAAGHVFTKVGTGAASVVNDATKGNVMQFSGSSYFTTPMVSNISLSNLHFKMRIVFKSTVSSENMVFSTGDFYSSGSIVGGILLTLFNATGTQLFCTDSAGTFTRCQFSYTVSTWRDLTIEWIPTTKTMIIHDNDSNTNVFSGTVPAGFGNGTQFAIGASYVRGAGNANFQGQIQRIRIDAVL
Physico‐chemical
properties
protein length:217 AA
molecular weight: 23231,88090 Da
isoelectric point:6,80985
aromaticity:0,11060
hydropathy:0,13134

Domains

Domains [InterPro]
IPR013320
STR
58–215
IPR013320
UYE98982.1
1 217
Architecture
STR
STR 58-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE98982.1
1 217
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,3030
Central domain 50 206 158 0,1492
C-terminal 207 217 10 0,9831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-206
C-terminal
207-217

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XbC2
[NCBI] 		2978503 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE98982.1 [NCBI]
Genbank nucleotide accession
OP292654 [NCBI]
CDS location
range 362505 -> 363158
strand -
CDS
ATGTTACCATTTCCACAATTAGTACAGTACGGAAATGTTGTTCAGACAGCATTAATGGATATTAATTTTAATAATAGTTCTGTTGGAAGTACTACAGTTACTGATGCTGCTGGACATGTTTTTACGAAGGTAGGAACGGGAGCAGCATCAGTAGTTAATGATGCCACTAAAGGTAATGTTATGCAATTCAGTGGTTCATCATATTTTACTACACCAATGGTAAGCAACATATCATTAAGTAATTTACATTTTAAGATGCGAATAGTATTCAAGAGTACTGTATCATCTGAAAACATGGTATTCAGTACTGGTGATTTTTATTCTAGTGGTTCAATTGTTGGTGGTATATTACTAACGTTGTTCAATGCTACTGGTACTCAATTATTCTGTACTGACAGTGCTGGTACTTTTACCAGGTGTCAATTCTCTTACACAGTTAGTACTTGGAGAGATTTAACTATCGAATGGATTCCGACTACCAAGACAATGATTATCCACGATAACGATAGTAATACAAATGTATTCAGTGGTACAGTACCGGCAGGATTTGGCAATGGTACACAATTTGCCATCGGTGCTAGTTATGTACGTGGTGCTGGTAATGCTAATTTCCAGGGTCAAATACAAAGAATAAGAATAGACGCAGTACTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d467b3de3773c2f5161e4c22942757afa264d70a6f522ca4bd3810765e95d677
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank