Protein

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Genbank accession
WCZ56500.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGADDADKAVLWPIEDGGDGNYYVWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGMLVWEQLGEGSVLNQPHMQTKTTPYTVYRFDDNGNWVTNPSTVLASVTQRMDKGYKPNINDLDIWDSLPENIKNQTAGATLRVMSGSNIIVNSPEATFGGYLFTLCNRILVKNPRNFIAWESGITFENHHTSAWGYGNWVVGGEIKYGSGSAVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDVNADTGSPVERVDDYPLSQYPWFQLPTKHIIRNIITKDCMGIGAWWDGQNNIIDNIVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGSSRLRGVLIHAYTTEGYAVYAPQSEISAVACAGSGTKKILCTYIGDVQGGNINVQHNENQMTLAMRPAMGGTINPSLVMTADCQVALPGGEASIVKLSAIQDGVRVGELQLNRLGFKHMSIPVSPSQLPDSALEHNSSIGFFFGSDGVLRILAKKPDGAYVTYTLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73243,13440 Da
isoelectric point:5,05653
aromaticity:0,09024
hydropathy:-0,23521

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–136
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
93–132
IPR040775 IPR011050
IPR015331
RBD
138–675
IPR015331
WCZ56500.1
1 676
Architecture
ATT
STR
ATT 65-136 | STR 137-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ56500.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9926
Central domain 156 560 406 0,9898
C-terminal 561 676 115 0,8525
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-560
C-terminal
561-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K6
[NCBI] 		3027646 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ56500.1 [NCBI]
Genbank nucleotide accession
OQ291021.1 [NCBI]
CDS location
range 22901 -> 24931
strand +
CDS
ATGTCTAGCGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGCGGTGTAGCTGGCGGCGCAGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACCTTGCCCGCGGTTTTACGTGATGCTGGTTTCTCCCCGGCGTCTTTCAACTTCACAACCGGCGGGACCCTGGGAGCTGACGACGCGGATAAAGCGGTTCTTTGGCCTATTGAGGACGGCGGAGACGGTAACTATTACGTATGGCGCGGGTCACTCCCTAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACGGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGGGATATCACCTTCCGTGCCGAAGCAGATAAGAAATTTAAATACTCCGTTAAGTTGTCGGATTTTACCACTTTACAGCAATTAGCTGATGCTGCCGTCGACAGCGTTCTTATCGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAACTTCGGCGGTAAGACCCTGACCATAGACTGTAAAGCGAAGTTTATTGGCGACGGTATGCTAGTCTGGGAACAACTCGGCGAAGGGTCTGTTTTGAACCAGCCGCATATGCAGACAAAAACAACGCCGTATACTGTATATAGATTCGATGACAACGGTAACTGGGTGACCAATCCGTCAACGGTGCTGGCGTCGGTAACTCAAAGGATGGACAAAGGGTATAAGCCTAACATTAATGATTTGGATATCTGGGACAGCTTACCCGAGAACATAAAAAATCAAACAGCCGGTGCAACACTCCGCGTTATGAGCGGGTCAAACATAATCGTAAATTCCCCGGAAGCGACTTTCGGTGGCTATTTATTCACCCTATGTAATCGTATATTGGTTAAAAACCCACGAAATTTTATTGCATGGGAATCAGGAATTACTTTCGAAAACCACCATACATCCGCATGGGGTTATGGTAACTGGGTTGTAGGAGGGGAGATAAAGTATGGTTCAGGGTCTGCCGTTTTGTTTATTCGCAACGACGGCGGTGATGACCATGATGGAGGGGTGAGAGACCTTATATCTTATCGTGTTGGGGAAAGCGGGGTAAAAACTTACCAGAACGAAATAGGCGGCAGGTCCGCCCGGAACTACCGCCTGGTATTCGATAATATTACGACCATACAGTGCTATTACGACGGGATAGATGTCAACGCAGATACCGGTTCCCCGGTTGAGCGTGTAGATGATTACCCACTTTCCCAATATCCGTGGTTTCAGTTGCCGACTAAACACATAATTCGCAACATAATCACGAAGGATTGCATGGGTATTGGTGCCTGGTGGGATGGTCAGAATAATATCATAGATAATATTGTGACATATGAGGCCCACAAAGAGGGGATTTTTGATAGAGGTACTAACAATGATATCACTAACGTAACGGTTATAGGTGCGAACAAGGATTTAACTAACCTGAATCAGCTTACCTGCGAAGGCAGTAGCCGATTGCGGGGCGTGTTGATTCATGCGTATACCACAGAAGGATATGCCGTGTATGCACCACAATCGGAAATATCCGCTGTCGCTTGCGCCGGTTCAGGTACGAAAAAGATACTTTGTACCTATATTGGTGATGTACAGGGTGGCAACATTAATGTCCAGCATAACGAAAACCAGATGACCCTTGCTATGCGTCCTGCGATGGGCGGTACTATAAATCCATCGCTAGTAATGACCGCAGATTGCCAAGTTGCCCTACCTGGGGGTGAAGCTAGTATTGTTAAGCTTTCAGCGATACAGGATGGTGTACGAGTAGGTGAGCTCCAACTTAACCGCTTAGGTTTTAAACATATGAGCATACCAGTATCCCCATCGCAATTACCGGATAGTGCATTGGAACATAACTCATCCATAGGCTTTTTCTTTGGAAGTGACGGGGTATTGCGAATCCTCGCCAAGAAACCAGACGGGGCTTACGTAACCTATACCCTATCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7e60eef3665baf86acf908f4f00b7a96fffb3e89e5c77c33f5829fa8fffccfe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7161
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K6 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank