Protein

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Genbank accession
YP_010658593.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATISKCDKTPLTPIPNQLPNPNSIIPAWDRDRLADGNALNDQAIALLQRVAAVQESVGVTVQQFGAVGDGVVNDHAAFQKTIDYVVAMAYAQNKTEGLPPIVIPSGVYKIDGTLTTRPWIQIKTTGSVHLDFRSLLPTADAIVCHNLTTIPGGESRFASNHAPFLNGSNGTIFIEGPGKAVSTGSGLKMGNFSAGAGQFQDARITNIVISGFHIAQRWGNHNTYLCRTENCRFEQNNYAVAAIEVQNFNSGERMEWSGCTLAGAVAALMHNQVGFDSNFYGCSFDFNDDVVRFGSGSSFAAVRMEHCYYEAFSGLLVNGSALTGSDNTNQIAVMLSDAIVLARGRDSSKGVNSPSRTMFRGRFSLGIKGIKLRYETRPYLEDACLIDSDVTVVEATGYHVAPYQLYMRTSQIVNDDFDFQRNADGTSLESLTSWQAGFIATVPTRGLATVGGKKVLRIIGTSGNNNSQFTIRTKGKIPAEAGDILFSNACINAEGATGTIQVLSRVEFYDANDQLLTTQPAFAEYPFRTALNDSTVPNFSSGNARYMDTQGYRAFAPKNTSYAKHVLFIGAFDGTILISRARVWK
Physico‐chemical
properties
protein length:586 AA
molecular weight: 63427,56540 Da
isoelectric point:6,56333
aromaticity:0,09556
hydropathy:-0,13652

Domains

Domains [InterPro]
IPR012334
STR
42–353
IPR012334
IPR011050
STR
47–328
IPR011050
DC_0903
STR
60–582
DC_0903
IPR024535
ENZ
61–118
IPR024535
YP_010658593.1
1 586
Architecture
STR
STR 42-582 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010658593.1
1 586
Domain Start End Length (AA) Confidence
N-terminal 1 74 74 0,9802
Central domain 75 405 332 0,9819
C-terminal 406 586 180 0,9920
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-74
Central
75-405
C-terminal
406-586

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage C121
[NCBI] 		2914029 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010658593.1 [NCBI]
Genbank nucleotide accession
NC_070858.1 [NCBI]
CDS location
range 63672 -> 65432
strand -
CDS
ATGGCAACTATTTCGAAGTGCGATAAGACCCCACTTACTCCTATCCCCAATCAGCTTCCGAACCCCAACAGTATTATTCCTGCTTGGGATCGGGATCGTCTTGCTGATGGTAATGCTTTGAATGATCAGGCTATCGCTCTGCTTCAGCGTGTTGCGGCTGTGCAGGAATCGGTGGGCGTAACTGTTCAACAGTTTGGTGCTGTTGGTGATGGTGTAGTTAACGATCATGCAGCATTTCAGAAGACTATTGATTACGTCGTAGCTATGGCATATGCACAGAATAAGACGGAAGGTCTTCCGCCTATCGTTATTCCTTCTGGTGTGTACAAGATCGATGGCACTCTGACTACTCGCCCGTGGATTCAGATTAAGACTACTGGCTCCGTACATCTGGACTTCCGTAGTCTTTTGCCTACTGCTGATGCCATTGTTTGTCATAACCTGACTACTATTCCCGGTGGTGAATCGCGGTTCGCCAGTAATCATGCTCCGTTCTTGAATGGTAGTAACGGTACGATCTTCATCGAAGGTCCGGGCAAGGCTGTCAGTACTGGCAGTGGTTTGAAGATGGGTAACTTCTCAGCAGGTGCTGGACAGTTCCAAGATGCCCGCATTACCAACATCGTCATCTCTGGCTTCCACATTGCTCAGCGGTGGGGCAACCACAATACGTATCTGTGTCGTACTGAGAACTGCCGATTCGAACAGAACAACTATGCCGTTGCAGCTATCGAAGTTCAGAACTTCAATAGTGGCGAACGTATGGAATGGTCTGGTTGTACTTTGGCTGGTGCTGTTGCAGCACTAATGCACAATCAAGTTGGTTTTGATTCGAACTTCTATGGTTGCTCGTTCGATTTTAACGACGACGTCGTTCGTTTTGGTTCTGGCTCATCCTTCGCTGCTGTGCGTATGGAGCACTGCTACTACGAGGCATTCTCTGGACTTTTGGTCAATGGTTCTGCACTTACCGGTTCTGATAACACCAATCAAATTGCAGTGATGCTTTCCGATGCCATTGTGCTGGCACGAGGACGTGATTCTAGTAAGGGTGTGAATAGCCCTTCTCGTACCATGTTCCGTGGTCGATTCTCTCTTGGTATCAAGGGAATCAAGCTTCGTTATGAGACTCGACCGTATCTGGAAGATGCTTGCCTAATCGATTCGGATGTGACTGTTGTTGAGGCAACTGGCTACCACGTTGCACCGTATCAGCTGTATATGCGTACTAGTCAGATTGTCAATGACGACTTTGACTTCCAACGCAATGCTGATGGTACTTCTCTGGAAAGTCTGACCTCTTGGCAAGCCGGTTTTATTGCAACCGTACCTACTCGTGGTCTAGCAACTGTTGGTGGTAAAAAGGTTCTTCGTATTATCGGTACATCCGGTAATAACAATTCTCAGTTTACTATCCGAACCAAGGGTAAGATTCCAGCAGAGGCTGGGGACATTCTCTTCTCCAATGCTTGCATTAATGCGGAAGGAGCCACTGGAACGATTCAGGTTCTGTCTCGTGTGGAGTTCTACGATGCTAATGACCAGTTGCTCACCACTCAACCGGCATTTGCTGAATATCCATTCCGAACGGCTCTGAATGATTCCACGGTACCTAACTTCTCTAGCGGTAATGCTCGGTATATGGATACTCAGGGGTATCGAGCCTTCGCCCCTAAGAATACGTCCTATGCCAAGCATGTTCTGTTCATTGGTGCCTTTGATGGCACTATCTTGATCAGCCGTGCACGGGTCTGGAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
68f96025a09e0d5d20e9c1f836b2cbe5ca90a855f5fae13d97ecb99a71a6b4e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7285
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50