Protein

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Genbank accession
UYM28903.1 [GenBank]
Protein name
hinge connector of long tail fiber proximal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MADLKASSTVGGAVIWHQGNFPLFPVGDSLLYKTFKVYTEKDKPQAIDNDFVSKAQGGEYLKVVNFVEGFGFTDNNGYKIKFGKPGSTEPTVNYSASIKIESPFAFETSENKPFIIFDPSQDLSNPRLTVMGKVIAGEVWDSNTRVFSPANPPTPTDVSLGNVTNDKQVKINTTDLQTMKGELRAPNMSSENPAIEPNQLTRYDQTVLRDADQDFGYYS
Physico‐chemical
properties
protein length:219 AA
molecular weight: 24183,69270 Da
isoelectric point:4,88050
aromaticity:0,10959
hydropathy:-0,49954

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYM28903.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 64 64 0,9316
Central domain 65 208 145 0,2631
C-terminal 209 219 10 0,8517
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-64
Central
65-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SspM_LC53
[NCBI] 		2989509 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYM28903.1 [NCBI]
Genbank nucleotide accession
OP617331 [NCBI]
CDS location
range 158171 -> 158830
strand +
CDS
ATGGCCGATTTAAAAGCTAGTTCTACGGTCGGAGGAGCAGTCATTTGGCACCAAGGTAATTTTCCTTTGTTCCCAGTTGGTGACTCTCTTCTGTACAAAACATTTAAGGTTTATACAGAAAAAGATAAGCCACAAGCAATAGATAATGATTTTGTTTCTAAAGCTCAAGGCGGCGAATATCTTAAAGTAGTGAATTTTGTTGAAGGCTTTGGATTCACAGATAATAATGGATACAAGATTAAATTTGGCAAGCCAGGTTCTACCGAGCCTACTGTAAATTATTCAGCGTCTATTAAGATTGAATCACCATTTGCTTTCGAAACTAGTGAAAATAAACCATTTATTATTTTTGACCCAAGTCAGGATTTAAGCAATCCACGTTTGACAGTTATGGGTAAAGTTATTGCTGGAGAGGTTTGGGATTCTAATACAAGAGTCTTTAGTCCGGCTAACCCACCTACTCCTACAGATGTAAGTCTTGGTAATGTAACTAATGACAAACAGGTCAAGATAAATACTACTGACTTACAGACTATGAAAGGTGAGCTTCGAGCCCCTAATATGTCTAGTGAAAATCCGGCAATTGAGCCGAACCAATTAACTCGATACGACCAAACGGTTCTTCGAGATGCAGACCAAGATTTCGGCTATTACAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08d4138ef8772ad044eb2acf9be4cdbce7a6ddbb3b9b336d434386baaec43c85
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4753
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
An OmpW-dependent T4-like phage infects Serratia sp. ATCC 39006 Mahler,M., Malone,L.M., van den Berg,D.F., Smith,L.M., Brouns,S.J.J. and Fineran,P.C. — — GenBank