Protein

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Genbank accession
XPK41771.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANCNDYISADDLKTGKQAILHIEHVAKSRDANGNHALDVTDTIRDQSVTNKTLDGLENLYNQAISQVGYITMDSFEDGATLTLPNQVLRYKSTGEYYRWDGGFPKIVPAGSTPDSTGEVKLGAWVSVGDASLRSDLALTTGAGLVGTTSGRTVQAEFDILKMGYKTPDDFGAKGDGSTDDTNAILDALSWASANGLPLRIPCKTYVWNGDAIPYDNVTIIGDKRPYADSLLTRLLDGSIIVGTLRFSGKNVQISNIGVDHGSFRFPSTAGDALTVSAPEKSGQYCVIRNCIGLGRNPTDAFHSILCEGYKYSIIEDCIGIQNTYSLAHKSGYSITNNIISRNSNTGVIVKSDSAFGDASFSNITNITIDGNENCNIGLWVFAQDAQLQKVNVSNIVTSGCKYDMVVQSDTGVINEININNLASSGASIASLALVANAVDKIYTANISNISAGEVTGQIIDAQAANLLNISNVNGRITSESTHVNDSIKIGPLVNVSNLVNITPTLNYDLVTQAGVTFNNAFDKNSISNVRAAIYGSGAPRPGYATQDASGVSGVLSVRYSQTNSSFMKLTLPSGAAEIATINTTAVNGSVIPEGYTLWIQNATSWQNLTITPSTAGHIVTTGNTPKVLAGGDKVGFMFDGNTWIQM
Physico‐chemical
properties
protein length:647 AA
molecular weight: 68569,67230 Da
isoelectric point:4,94274
aromaticity:0,07110
hydropathy:-0,09815

Domains

Domains [InterPro]
DC_1596
STR
1–395
DC_1596 DC_0524
IPR040775
RBD
64–130
IPR040775 IPR011050 IPR057996
G3DSA:2.10.10.80
ATT
69–139
G3DSA:2.10.10.80 IPR024535
IPR012334
STR
169–540
IPR012334
XPK41771.1
1 647
Architecture
STR
ATT
STR
RBD
STR 1-68 | ATT 69-139 | STR 140-540 | RBD 541-647
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK41771.1
1 647
Domain Start End Length (AA) Confidence
N-terminal 1 180 180 0,9862
Central domain 181 540 361 0,9880
C-terminal 541 647 106 0,9499
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-180
Central
181-540
C-terminal
541-647

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KarinMuster_Bas82
[NCBI] 		3398420 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK41771.1 [NCBI]
Genbank nucleotide accession
PQ850612.1 [NCBI]
CDS location
range 30675 -> 32618
strand -
CDS
ATGGCTAACTGTAACGATTATATCAGTGCTGATGATTTGAAAACAGGCAAACAAGCGATTTTACATATTGAACACGTTGCGAAAAGTCGTGATGCTAACGGTAATCATGCGTTGGATGTTACCGATACGATCCGTGATCAATCAGTTACCAACAAGACGCTTGATGGTTTAGAAAACCTGTACAATCAGGCTATATCTCAGGTTGGCTATATCACAATGGATAGCTTCGAAGATGGCGCGACATTAACATTGCCTAACCAGGTGTTGCGATATAAGTCGACAGGAGAATATTACCGATGGGACGGGGGGTTTCCAAAAATCGTTCCAGCCGGCTCAACTCCAGATAGCACAGGGGAGGTTAAATTAGGAGCGTGGGTTAGTGTTGGTGATGCTTCATTGAGAAGTGACTTGGCCCTAACCACAGGCGCAGGTCTAGTTGGTACAACATCCGGCAGGACCGTACAGGCAGAGTTTGATATCCTCAAAATGGGGTACAAGACGCCTGATGACTTTGGCGCAAAAGGTGATGGAAGTACAGATGACACCAATGCCATATTAGATGCTCTTTCGTGGGCCTCGGCCAACGGACTGCCACTTAGAATTCCATGCAAAACATATGTTTGGAATGGCGACGCTATACCATACGATAATGTGACCATCATTGGCGATAAGCGGCCCTATGCAGATTCATTGCTAACACGTCTTCTTGATGGCAGCATTATCGTCGGTACGCTCAGATTTAGCGGCAAAAACGTACAAATCAGCAATATTGGAGTCGATCATGGTTCGTTCCGGTTCCCATCGACAGCTGGTGATGCTCTCACCGTCTCAGCTCCTGAAAAATCAGGGCAGTATTGCGTTATAAGAAACTGCATTGGGCTGGGACGAAATCCAACCGATGCATTTCACTCTATTCTGTGTGAAGGTTATAAATATTCAATTATTGAAGATTGCATAGGCATACAGAATACATATAGCCTCGCGCACAAAAGTGGTTATTCAATCACGAATAATATAATATCCAGAAACTCAAACACAGGTGTTATTGTTAAATCTGATAGTGCATTTGGTGATGCCAGTTTCTCTAATATTACCAATATTACCATTGATGGAAATGAAAACTGCAATATTGGCTTGTGGGTTTTTGCGCAAGACGCTCAACTACAGAAGGTTAATGTATCGAATATTGTAACGTCTGGATGCAAATACGACATGGTGGTGCAGTCTGATACTGGCGTCATCAATGAAATTAACATTAACAATCTGGCAAGCTCTGGAGCGTCAATAGCGTCATTGGCACTGGTGGCTAATGCAGTCGATAAAATATACACCGCAAACATATCAAATATTTCAGCTGGCGAAGTTACTGGGCAAATTATTGACGCACAGGCGGCTAATTTGCTGAATATATCTAATGTGAACGGGCGGATTACTAGCGAATCAACCCACGTTAATGACTCTATAAAGATAGGACCATTAGTCAATGTTTCAAATCTTGTTAATATCACACCAACTTTGAACTATGACCTGGTCACTCAGGCTGGAGTGACTTTTAACAACGCTTTTGACAAGAACAGCATCAGTAATGTTCGCGCTGCGATATACGGAAGCGGCGCTCCGCGACCCGGATATGCAACACAGGATGCAAGCGGTGTTTCTGGAGTGCTTTCGGTAAGATACAGCCAGACAAACTCATCATTCATGAAGCTAACGCTTCCGTCAGGGGCAGCTGAGATAGCTACCATAAACACAACAGCCGTCAATGGTTCGGTAATACCTGAAGGATATACATTATGGATACAAAACGCCACCTCCTGGCAAAACCTAACAATAACGCCTTCTACTGCCGGTCATATCGTTACAACAGGGAATACTCCAAAGGTGTTAGCTGGCGGTGATAAGGTTGGCTTTATGTTTGATGGGAACACATGGATTCAGATGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
62ec323764cc62b0a35d2cefd6256c7ad7e017c0ca8c203ccbe129299eb1a51c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8231
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank