Protein

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Genbank accession
UUB18444.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MALISQSVKNLKGGISQQPDILRFPEQGAEQINAWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSVEQYYVVFTGQGIRVFDLNGKEYAVKGDLSYVEVGNPRDDLRMVTVADYTFIVNRNMVVRADTAPLYDLKENGDCLINVRGGQYGRTLAFTINGVRIAYKIHNGVGEGAEQAVQETDAQWLVAKLAGLARAHASFKDWTFNEGPGFIHVIAPANSQINSLSTEDGYANQLLNAVMHTSQSFSKLPIEAPNGYTVKIVGDTSKTSDQFYVQYDNVKKVWKEVAGWGVQKGLNGDTMPHALVRQADGSFQMQVLPWSQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKTVELNLTTEFDVSDRARPFGVGRGIYFASPRASYTSLHRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSDNAPSRIFLYKFLYLNEEIVQQSWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFLEEPYRIYIDNKLEITIPEGSYDDDTYETVIYPSHFYGMKNYLGKFYIVAMDGKVTGFDEPHGGWPDGEPRLTLTGNREGETVYLGLAIDFRYVFSKFLIKKTADDGSMATEDIGRLQLRRAWVNYEDSGAFVVEVENTSRLFSYDMAGARLGSNALRAGGLNVGTGQFRFPVAGNAQLNEVRIVSDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 88500,50160 Da
isoelectric point:5,51153
aromaticity:0,11069
hydropathy:-0,24830

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
UUB18444.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UUB18444.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9959
Central domain 141 347 208 0,1281
C-terminal 348 795 447 0,2705
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-347
C-terminal
348-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalM_PC127
[NCBI] 		2961705 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UUB18444.1 [NCBI]
Genbank nucleotide accession
ON754979 [NCBI]
CDS location
range 3988 -> 6375
strand -
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAAGGCGGTATCAGTCAACAGCCAGACATCTTAAGGTTCCCCGAACAGGGTGCCGAACAGATTAACGCTTGGTCGTCTGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACAATTGGAGACCAGAATGCCCTTGGTGCCAAACCTCTCGTTCACCTAATCAACCGCGACAGTGTCGAACAGTATTACGTAGTGTTTACCGGACAGGGTATTCGTGTGTTCGACCTCAATGGTAAAGAGTATGCTGTGAAGGGTGACTTGTCCTACGTGGAGGTAGGGAACCCACGAGATGACTTAAGGATGGTCACTGTGGCTGACTATACGTTTATCGTAAACCGTAACATGGTGGTGCGCGCTGACACTGCCCCTCTGTATGACCTAAAGGAGAATGGGGACTGTTTGATTAACGTCCGAGGTGGTCAGTATGGGCGTACATTGGCATTCACTATTAATGGTGTCCGTATTGCCTATAAGATTCACAATGGTGTTGGTGAAGGTGCTGAACAGGCTGTACAGGAAACTGACGCACAGTGGCTCGTTGCTAAACTAGCTGGCCTTGCTCGTGCGCATGCTTCCTTTAAGGACTGGACGTTCAACGAAGGTCCGGGGTTCATCCACGTCATTGCTCCGGCTAACAGCCAGATTAACTCACTGTCCACAGAAGATGGTTATGCGAACCAGTTGTTGAATGCAGTGATGCACACCAGCCAGTCATTCAGTAAGTTGCCAATTGAGGCTCCTAATGGCTACACAGTGAAGATTGTGGGTGACACCTCTAAGACTTCAGACCAGTTTTACGTTCAGTATGACAACGTGAAGAAGGTGTGGAAAGAGGTGGCTGGTTGGGGCGTACAGAAGGGACTCAATGGTGACACGATGCCACATGCTCTCGTGCGCCAAGCTGATGGCTCATTCCAGATGCAGGTGCTTCCGTGGTCACAGCGTACTTGTGGTGACATGGATACTAACCCTACTCCGTCTATTGTTGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATCGTGATGTCCCGTACCTCCAAGTATTTCTCACTGTTCCCTGCATCCGTGGCTAACCTGTCAGATGATGACCCAATCGACGTTGCTGTGTCCCACAACCGAATCTCAATCCTGAAGTACGCTGTACCGTTCTCTGAAGAGTTACTCCTATGGTCAGACCAAGCACAGTTCGTGTTGTCTGCTCAAGGTATCCTCTCTCCGAAGACCGTAGAGTTGAACCTCACGACCGAGTTCGATGTGTCAGACCGAGCGAGACCTTTTGGTGTTGGTCGTGGTATTTACTTCGCGTCACCTCGTGCTTCCTATACGTCACTGCATCGCTACTATGCGGTACAGGATGTTAGCTCTGTGAAGTCTGCTGAGGACATGAGCGCACACGTACCGAGCTACATTCCGAACGGTGTGTTCTCTATTCGCGGGTCTGGTACTGAGAACTTCATCTCCGTTCTGTCTGACAATGCTCCTAGCAGAATCTTCCTCTACAAGTTCCTATACTTGAACGAAGAAATAGTACAACAATCATGGTCCCATTGGGAACTAGGTAGTAACGTAACGGTTCTGGCGTGTGACTCTATCGGGTCCACCATGTACCTTGTGTTGCGCAACCAGTCCCACACTTGGATGTGCCGTGCTCACTTTACGAAGAACAGCATTGACTTCCTTGAAGAACCTTATCGCATCTACATAGATAACAAGCTGGAGATAACAATTCCCGAAGGCTCCTATGATGATGACACATATGAGACTGTTATCTATCCAAGCCACTTCTACGGAATGAAGAACTATCTAGGTAAGTTCTACATTGTGGCGATGGATGGTAAGGTAACAGGGTTTGATGAGCCTCATGGTGGATGGCCTGATGGTGAACCTCGCTTGACCCTTACTGGGAACCGCGAAGGTGAGACCGTCTACCTTGGGCTGGCAATCGACTTCCGCTACGTGTTCTCTAAGTTCCTCATCAAGAAGACCGCTGACGATGGGTCTATGGCTACCGAGGACATTGGTCGCTTGCAGCTTCGCCGCGCATGGGTGAACTATGAGGACTCTGGTGCATTCGTTGTGGAAGTGGAGAACACCTCACGTCTGTTCAGCTACGATATGGCAGGTGCCCGTTTGGGTTCCAATGCGCTACGTGCTGGTGGACTTAACGTTGGTACAGGTCAGTTCCGATTCCCGGTTGCTGGAAACGCACAGTTGAATGAGGTCCGTATTGTCTCTGACCACACCACACCACTGAACGTTATTGGTTGTGGCTGGGAGGGTAACTACCTTCGTCGTTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3e1b4631f9804ba2eb06892bfc9949e95c12bd10eed7450f27848dea24a0ec9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3087
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Salmonella phage PC127 Zhuang,Y. 2013-12-26 — GenBank