Protein

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Genbank accession
AIK68522.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MAKVSGSIPNFANGVSQQAMALRLATQGELQTNAYSTIVDGLKKRPPTQLRASLGAALEGNVFTHQINRDANERYEVIATPTAIRVFTLDGVERIVTAPNGFGYLSYDEGAYDRPPYRALTVGDYTYITNQTTKVELDTAVVEQVSPSEALVNVMAGNYGKSYAIKINNVEVARYLTPDGQSAAQSPAVDVSYIARRLATGETVVLKETVNGKANGDWTWEATDTNLAANGITPANGWTVRVFKSTIYIKKDDGADFSIAVDDGYNGHAMKAIRKTVQDFADLPAYCEDDVAVEVTGSVGTQFDNYFVRFDRQDANSSIGVWREIPKPGIVTALKASTMPHVLTRQADGTFKFDVANWDKRKCGDDEIAPGPSFVGEKVNEVLFFKNRLGFLAGENVVLSRHGSFFDFWRSTATALLDDDPIDVAATDNGVSVLRSAVASSDRLVLWADQTQFTLMGNELLTPKTASIRPSTSFSTSSKARPVRAGNSIFFPVNRGQFTMIRDYKIDVNTGLADAEDTTGHVPQYIPGTAIKLAASTHEDILVVQADGDAASLYVYKYYWSNDQQLQASWSRWTFPGVTSILDIGFIDSQLVLVLNRGTKAFIEVMDIQPGGVDPNIRFVVNLDRRFRVENYGSRTYDPYSDLTYVQTGHDMNDAAYVCVTAGSPNAILEPGLQIGIVSKADGSVVLQGDLRDVPLYFGTTYETRYGLSTIFIRQDSRNGGVSVITEGRLQLISLLIQFSKTAYFRVEVTPLARETRPYNSTGRLMGDPNNRVDEVNLADGSFKVPILSKNDRVKVEIVNDSYLPSCLLSAEWVGNYVQKSQRI
Physico‐chemical
properties
protein length:824 AA
molecular weight: 90459,43380 Da
isoelectric point:5,20437
aromaticity:0,09587
hydropathy:-0,21638

Domains

Domains [InterPro]
IPR058003
TTP
1–824
IPR058003
AIK68522.1
1 824
Architecture
TTP
TTP 1-824
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIK68522.1
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9933
Central domain 147 350 205 0,4147
C-terminal 351 824 473 0,2071
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-350
C-terminal
351-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Mesorhizobium phage vB_MloP_Lo5R7ANS
[NCBI] 		1527771 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mesorhizobium loti
[NCBI] 		381 Bacteria > Proteobacteria > Alphaproteobacteria > Rhizobiales > Phyllobacteriaceae > Mesorhizobium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIK68522.1 [NCBI]
Genbank nucleotide accession
KM199771 [NCBI]
CDS location
range 29559 -> 32033
strand +
CDS
ATGGCTAAGGTCTCTGGGTCCATCCCTAACTTCGCCAATGGCGTCAGTCAGCAGGCTATGGCCCTGCGGCTGGCAACCCAAGGCGAACTCCAGACGAACGCCTATTCCACCATCGTGGATGGCCTCAAGAAGCGCCCTCCGACACAGCTCAGGGCGTCCCTTGGCGCGGCCTTAGAGGGCAACGTCTTCACCCATCAAATCAACCGTGACGCCAACGAGCGGTACGAGGTCATTGCCACACCCACGGCGATCCGCGTGTTCACCCTCGACGGCGTTGAGCGCATCGTCACGGCTCCCAATGGCTTCGGCTATCTGAGCTACGACGAGGGTGCCTACGACCGTCCTCCCTATCGGGCACTGACGGTTGGCGACTACACCTACATCACGAACCAGACGACGAAGGTCGAGCTGGACACTGCGGTGGTCGAGCAGGTCTCCCCGAGTGAGGCGCTGGTCAACGTCATGGCCGGCAACTACGGCAAGAGCTACGCGATCAAGATCAACAACGTCGAGGTGGCTCGCTACCTGACGCCAGATGGTCAGAGCGCCGCTCAGTCTCCAGCCGTGGACGTCTCCTACATCGCCCGCCGATTGGCCACTGGCGAGACCGTTGTCCTCAAGGAAACTGTCAACGGCAAGGCGAACGGCGACTGGACGTGGGAGGCGACCGACACGAACCTCGCCGCCAATGGCATCACCCCGGCAAACGGCTGGACCGTCAGGGTCTTCAAGTCGACGATCTACATCAAGAAGGACGACGGTGCCGACTTCAGCATCGCCGTCGACGATGGCTACAACGGCCACGCCATGAAGGCGATCCGCAAGACGGTTCAGGACTTCGCTGATCTGCCGGCTTATTGCGAGGACGATGTCGCCGTAGAGGTGACCGGCTCGGTCGGCACCCAGTTCGACAACTACTTCGTCCGGTTCGACCGGCAGGACGCCAACTCCTCCATCGGCGTCTGGCGTGAAATACCCAAGCCCGGGATCGTCACCGCGTTGAAGGCCTCGACGATGCCTCACGTCCTGACCCGTCAGGCAGACGGCACGTTCAAGTTCGACGTGGCCAACTGGGACAAGCGGAAGTGCGGCGACGACGAGATAGCTCCCGGCCCGTCCTTCGTGGGCGAGAAGGTCAACGAGGTTCTGTTCTTCAAGAACCGCCTAGGGTTCCTGGCTGGCGAGAACGTCGTCCTATCCCGGCACGGCAGCTTCTTCGACTTCTGGCGCTCAACAGCCACGGCACTTCTCGACGATGATCCCATCGACGTGGCAGCGACCGATAACGGTGTCTCTGTGCTTCGCAGTGCGGTGGCCTCTTCGGACAGGCTGGTCCTGTGGGCTGACCAGACGCAGTTCACCCTCATGGGCAACGAGCTGCTGACCCCTAAGACAGCCTCGATCCGCCCCTCGACATCGTTCTCAACGTCCAGCAAAGCGCGCCCTGTGCGGGCTGGCAACTCGATCTTCTTCCCGGTTAACCGTGGCCAGTTCACAATGATCCGAGACTACAAGATCGACGTGAACACCGGCCTAGCGGACGCCGAGGACACGACCGGACACGTCCCGCAGTACATTCCGGGGACAGCCATCAAGCTCGCCGCGTCGACCCACGAGGACATCCTTGTGGTGCAGGCTGACGGTGACGCTGCGTCCCTCTACGTCTACAAGTACTACTGGTCGAACGATCAGCAGCTTCAGGCGAGCTGGTCCCGGTGGACATTCCCCGGCGTGACCTCGATCCTCGACATAGGCTTCATCGACAGCCAGCTCGTCTTGGTCCTCAACAGGGGCACCAAGGCGTTCATTGAGGTCATGGACATTCAGCCCGGTGGGGTCGATCCCAACATCCGCTTCGTGGTCAACCTCGACAGGCGCTTCAGGGTCGAGAACTACGGTTCCCGTACCTATGATCCCTACTCCGATCTGACTTACGTCCAGACCGGCCACGACATGAACGATGCAGCCTACGTCTGCGTCACGGCAGGCTCGCCCAACGCGATCCTTGAGCCAGGTCTACAGATCGGCATCGTCTCCAAGGCGGATGGCTCAGTGGTCCTCCAAGGCGATCTGAGGGACGTCCCGCTCTACTTCGGGACCACCTACGAGACCCGCTACGGGCTATCAACGATCTTCATCAGGCAGGACAGCCGCAACGGTGGCGTCTCTGTCATCACCGAGGGTCGGCTCCAGCTCATCAGCCTGCTGATCCAGTTCTCGAAGACCGCATACTTCCGTGTCGAGGTCACCCCTCTGGCTCGTGAGACGCGACCCTACAACTCGACTGGACGCCTCATGGGTGATCCGAACAACAGGGTCGACGAGGTCAATCTGGCAGACGGTTCCTTCAAGGTCCCGATCCTGTCCAAGAACGACCGAGTGAAGGTCGAGATCGTGAACGACAGCTACCTCCCGTCCTGCCTGCTCTCCGCAGAGTGGGTCGGCAACTACGTCCAGAAATCACAAAGGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d2dbd8ef4d9e9affcc8a4482ba14c20a3d4c0543c8585d7ed7bfe5731e13d7e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two T7-like Mesorhizobium loti phages vB_MloP_Lo5R7ANS and vB_MloP_Cp1R7ANS-C2 Halmillawewa,A.P., Perry,B., Gavard,R., Yost,C.K. and Hynes,M.F. 2021-02 — GenBank