Protein

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Genbank accession
XCO40318.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFSQAGGSVSKDVNKQSIARVYGVKMSEVAYLKAGLVLNGYKVLYDKTTQTCWYTETSTGTVSSWAISGETLTLTTSVGVYPLRIAIPYRISKLFYTDINKISWFPNMVVDILGKTESDKSGYGQFYYDPTDTTSVADNATIFVTTDGKRIKRIYKGEALSSWFSSYTDINTFLSKGNVRLLFDNSWTQTSSLVLKSNTTIKMLPGVLLTPGTTPIQSITAIGTLNTSATTTLSADAPVGANQIVVTNPLSFNVGDWIELRSEALVEGPNAQGVKQAHMRQITKIDTNTLYLDKAISYIFKVSDNSMIYKLNIVENITVDGVNLNNINYTNQYTIGMNFVYGNNISVINSTVFGSKDKYTGDVDGRSAIKFNSCRNVLCEKVEHIIKVGMVLKSLVILKM
Physico‐chemical
properties
protein length:403 AA
molecular weight: 44393,17240 Da
isoelectric point:9,01257
aromaticity:0,09677
hydropathy:-0,05980

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–91
G3DSA:3.30.2020.50 DC_0717 IPR057095
DC_0965
STR
180–395
DC_0965
XCO40318.1
1 403
Architecture
ATT
ATT
STR
ATT 1-91 | ATT 99-196 | STR 197-395 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40318.1
1 403
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,9437
Central domain 169 388 221 0,9896
C-terminal 389 403 14 0,9550
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-388
C-terminal
389-403

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146041
[NCBI] 		3232220 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40318.1 [NCBI]
Genbank nucleotide accession
PP889490.1 [NCBI]
CDS location
range 145061 -> 146272
strand +
CDS
ATGAATCCGCAATTTAGTCAGGCCGGTGGTTCCGTCTCTAAAGACGTGAACAAACAATCTATCGCACGTGTGTATGGCGTTAAAATGAGCGAAGTCGCTTATTTGAAAGCCGGATTAGTATTGAATGGTTATAAAGTGTTGTATGACAAAACAACCCAAACTTGTTGGTATACTGAAACCTCTACTGGAACGGTGTCTAGTTGGGCCATATCTGGGGAAACATTGACTCTAACCACAAGCGTTGGTGTTTATCCATTAAGAATTGCTATACCTTATCGGATAAGTAAATTGTTCTATACGGACATCAACAAAATATCTTGGTTTCCTAATATGGTTGTTGACATATTAGGCAAAACAGAATCGGACAAAAGCGGGTACGGACAATTTTATTATGACCCCACTGATACCACGAGCGTGGCAGATAACGCGACTATATTCGTAACCACTGATGGGAAAAGAATAAAACGAATTTACAAAGGAGAAGCCCTTTCTTCTTGGTTTTCTTCCTATACTGATATCAATACATTTTTATCAAAAGGAAATGTAAGGCTCTTATTCGATAATTCTTGGACGCAAACTTCTAGTTTGGTATTGAAGAGTAATACGACCATCAAAATGCTCCCTGGAGTTTTGCTTACTCCAGGAACAACACCTATCCAAAGTATCACGGCAATAGGGACATTAAACACCTCTGCTACAACGACATTATCTGCTGATGCTCCTGTGGGGGCTAACCAGATTGTTGTTACCAATCCCTTGTCATTTAATGTTGGGGATTGGATTGAATTAAGGTCCGAAGCATTGGTCGAAGGTCCTAACGCGCAGGGTGTTAAACAGGCGCATATGCGTCAGATAACAAAAATAGACACGAATACGTTGTATCTAGACAAGGCTATATCATATATTTTTAAAGTATCTGATAATTCTATGATATACAAATTGAATATAGTGGAGAATATCACGGTTGATGGTGTGAATTTAAACAACATAAATTATACAAATCAATATACGATTGGTATGAACTTCGTCTATGGAAACAACATTTCTGTAATCAATAGCACAGTATTCGGTTCTAAAGACAAATACACAGGTGACGTGGATGGCAGATCTGCAATAAAATTCAATAGTTGTCGAAATGTTTTATGTGAAAAAGTGGAGCACATCATCAAGGTTGGTATGGTGTTGAAGTCCTTGGTTATTCTGAAGATGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
10c5d1044ad26612be56342a398bf551e3e88dfb85f0de036cfc3765c4d183ce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7905
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank