Protein

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Genbank accession
WWD13259.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,97
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNNNSIFHSDMPFVLVDGTYEAGLGDAGNGFFVCQMPPDIVNIKSNDPGRVILTAIEINGTHRAFLNGTQSKVGQTIVATQADPFRSFASVSQTSGFAFGNSLASGTYNYNPSIGHEESISRSGTGGTTLHSTYHGIVRPGAGAPVGVTVAEAFAQLGFPTNSSTVPVDGNNPYYWDPGWMSPLGAAHRGHDWFYVCNSNIRGYGGVRQGLPGNVNTMYHDGGDRFVCRGSTTNLANQSGNSTILQDGYNITPTKVIWYVLNLRYSNGGMSISGNPFTGSDILISPSNFIIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGVFGDTTARCELVGSSNGGLWSPVDYGGAKSQISIYKFGAGKQWYVNSNNNTIGNEHGVVWGPSAVPLRLFGGNVGSSYMGDDITPSYPGTGDRYVGLSTIGLGIPGGNATVILTTEVISGNLNCAGVPANTWNNGVFQVQGRRAYSYSNGDAIFHQILTLPVGYLVPFHTTSAFRYTPNNALSRNSFIYTAKNLGNGNVELGVVMHVSLGSAVFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:585 AA
molecular weight: 62255,50700 Da
isoelectric point:7,69005
aromaticity:0,11111
hydropathy:-0,17778

Domains

Domains [InterPro]
IPR059609
RBD
1–585
IPR059609
WWD13259.1
1 585
Architecture
RBD
RBD 1-585
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWD13259.1
1 585
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1051
Central domain 11 225 216 0,7433
C-terminal 226 585 359 0,8008
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-225
C-terminal
226-585

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Baret
[NCBI] 		3098283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWD13259.1 [NCBI]
Genbank nucleotide accession
OR896834 [NCBI]
CDS location
range 105823 -> 107580
strand +
CDS
ATGGGTTTTTTCGCTGGAAAGTATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGGGGTGACATTAATCGTCACTATAGCCCAAATAATAATAGTATTTTTCATAGTGATATGCCATTTGTCCTAGTTGATGGTACTTATGAGGCAGGATTAGGTGATGCCGGGAATGGGTTTTTCGTATGTCAGATGCCTCCTGATATAGTAAATATTAAATCTAATGATCCTGGTAGAGTTATACTAACTGCTATTGAGATTAATGGTACTCACAGAGCTTTTCTTAATGGTACTCAGAGTAAAGTTGGTCAAACTATAGTTGCCACTCAAGCAGACCCCTTTAGATCTTTTGCTAGTGTTTCTCAAACCAGTGGATTTGCATTTGGTAATAGTCTAGCATCTGGAACTTATAATTATAACCCATCGATAGGGCACGAAGAATCTATCTCTAGGAGTGGTACAGGCGGTACTACGTTACATAGTACCTACCATGGGATAGTTAGGCCTGGTGCGGGAGCTCCTGTAGGTGTTACTGTTGCAGAAGCTTTTGCACAATTAGGGTTCCCTACTAACAGTAGCACAGTACCTGTAGATGGCAATAACCCGTACTATTGGGATCCTGGATGGATGTCACCCCTAGGAGCAGCGCATAGAGGGCATGATTGGTTTTATGTCTGCAATTCTAATATACGTGGGTACGGTGGGGTTAGACAAGGGCTCCCAGGTAATGTAAATACTATGTACCACGATGGTGGGGATAGATTTGTTTGTAGGGGATCTACTACTAATTTAGCTAACCAGTCTGGTAATTCTACAATACTACAGGATGGATATAATATAACTCCTACTAAGGTTATTTGGTATGTTCTTAACTTAAGGTACTCGAATGGCGGTATGAGTATTTCCGGCAACCCCTTTACGGGTTCTGATATTCTTATATCTCCTTCTAATTTTATAATTAAAGGGGTAAGTCTCCCTAATACCGGGTATAAATTTATAAATCAGAATGCTTTTGGTAACCTAGGTTACCGTCCTGATATGGAGTATATAGGGAATAACGCAGCGTATACTGGAGTTTTTGGGGATACCACTGCAAGGTGTGAACTTGTAGGATCTAGTAATGGGGGTTTGTGGTCTCCTGTAGATTATGGAGGGGCTAAATCTCAAATTAGTATTTATAAATTTGGGGCAGGTAAACAATGGTATGTAAACTCAAATAATAATACTATTGGTAATGAACATGGGGTTGTTTGGGGACCCTCAGCAGTTCCACTGCGACTTTTTGGTGGAAATGTAGGTAGTTCTTATATGGGAGATGATATTACTCCCAGCTACCCAGGAACTGGGGATAGATACGTTGGTTTATCCACTATTGGGCTAGGTATACCGGGTGGCAATGCTACAGTAATTCTTACCACTGAAGTTATATCAGGTAACCTTAACTGTGCAGGTGTTCCTGCTAATACATGGAATAACGGTGTGTTTCAAGTGCAAGGAAGAAGAGCATATAGCTATAGTAATGGAGATGCAATATTCCACCAGATTTTAACATTACCAGTAGGGTATTTAGTACCTTTTCATACTACATCTGCTTTTAGGTACACACCTAACAATGCCCTAAGTAGAAATAGTTTTATATATACTGCTAAAAATCTGGGGAATGGAAATGTAGAGTTAGGGGTAGTTATGCACGTAAGTTTAGGTAGTGCAGTTTTCCTACCGAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
39e627695282b8457d0ff43a4532fc8242419c976e7bffa2a357c39573c339af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2355
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50