Protein

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Genbank accession
QWY83437.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSRVIKTGNGVTNQFVVDFALGYLEQDDVKCRVGTEADGSGNPVYRTITFLSETLMQISGAAPGNGVQVVFERTVEKTDTIIHFSDGDVLDEANLDLAFKQAMMMVHEVLDGRFGAFNADVDFGNFKLLKVGTPTASTDGANKAYVDSKINTSTTNTTNAQSAAAAAANSQTAAAGSASAAATSATAAAGSASAALASQNAAASSATAAAGSATTANSHKNAAATSATSAATSATNADASEANALAYSNTAVTKASEAAASAASADTSEANALSSAIAAELSKDNAYKWASEAEDVLVDDGEHPTGYSAYHWALKAQEVLVTAGVTEVAGLAGVVLAPDLKTALDIFDVTSGSHNGKMDKSANLNDVANKATARSNLGTHDAANLTTGVVPAARITGAYGNFTTIGASGLVTVTADGEVFRAAGSATGDPYMTFYKASARQGYIQHTDGTNDGAGFRFFNDLTDDYLYLHNVNTIDALRFYDASTALHNVVWHSGNQPITTASTGNTLAKRDSSGDIHARLFRSEYDTTNGTVGYIMTQINTTTDNYIRPSTPAQVAAALGPILTADKVETNVSGEFTPVLAGLITWAHGLGAKPTMIDLFMICKTAEHGWAVNDEFGPIGNNIQYSDRWVHSLVWADSTNVYVRTQNTSGGNYVFPAIVNQDTGQPVYATAANWRLKIKVRK
Physico‐chemical
properties
protein length:685 AA
molecular weight: 71234,54470 Da
isoelectric point:4,99901
aromaticity:0,07737
hydropathy:-0,13343

Domains

Domains [InterPro]
DC_0245
STR
1–255
DC_0245
IPR005604
ATT
3–115
IPR005604 DC_1415
QWY83437.1
1 685
Architecture
ATT
STR
ATT
ATT 1-115 | STR 116-216 | ATT 217-676 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY83437.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,8348
Central domain 205 403 200 0,3082
C-terminal 404 685 281 0,9452
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-403
C-terminal
404-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X3_9
[NCBI] 		2836085 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY83437.1 [NCBI]
Genbank nucleotide accession
MW960034.1 [NCBI]
CDS location
range 37318 -> 39375
strand +
CDS
ATGGCATACTCAAGAGTTATCAAAACGGGTAACGGGGTCACGAACCAATTCGTCGTTGACTTCGCCCTTGGGTATCTTGAGCAGGACGACGTGAAGTGCCGTGTCGGTACAGAAGCTGACGGTAGCGGAAACCCCGTATACCGGACCATCACGTTCCTCTCTGAGACCCTTATGCAGATAAGCGGCGCTGCGCCCGGTAACGGTGTGCAGGTCGTGTTCGAACGAACTGTAGAGAAGACTGACACGATCATTCACTTCTCTGATGGTGACGTGCTGGACGAAGCCAATTTGGACCTTGCGTTCAAGCAGGCTATGATGATGGTGCACGAAGTGTTGGATGGCCGTTTCGGTGCGTTCAATGCGGACGTGGACTTCGGTAACTTCAAGCTGCTCAAGGTCGGTACTCCGACTGCATCTACGGATGGTGCCAACAAGGCGTACGTGGACAGCAAGATCAATACCAGCACAACCAACACTACCAACGCGCAATCTGCGGCTGCTGCCGCTGCGAACTCACAGACGGCTGCTGCTGGCTCTGCCAGTGCTGCGGCTACCTCGGCCACGGCTGCTGCCGGAAGCGCGTCTGCGGCCCTCGCAAGCCAGAATGCAGCGGCATCTAGCGCGACTGCGGCGGCTGGATCGGCTACGACCGCGAACAGCCACAAGAACGCGGCTGCTACCTCGGCTACGAGTGCAGCTACCAGCGCTACGAACGCTGATGCAAGCGAGGCTAACGCACTGGCTTACAGCAACACTGCTGTCACCAAGGCATCTGAAGCTGCTGCTTCTGCGGCATCTGCGGACACGTCTGAGGCTAACGCCCTGTCCTCTGCTATCGCTGCGGAACTGTCTAAGGACAACGCCTACAAATGGGCGAGCGAGGCGGAAGACGTACTGGTCGATGACGGTGAGCATCCTACGGGATACTCTGCGTACCATTGGGCGCTGAAGGCGCAGGAAGTCCTTGTTACTGCTGGTGTTACCGAAGTGGCTGGACTGGCCGGTGTCGTATTGGCACCAGACCTTAAGACTGCATTGGATATCTTCGACGTTACGAGCGGAAGCCACAACGGCAAGATGGACAAGTCGGCGAACCTGAACGACGTGGCTAACAAGGCTACGGCTCGGTCTAACCTCGGTACGCACGACGCAGCTAACCTGACGACTGGTGTCGTACCTGCTGCCCGCATTACAGGGGCGTACGGGAACTTCACGACGATCGGTGCATCCGGTCTAGTTACCGTCACCGCTGATGGCGAGGTATTCCGGGCCGCTGGTTCGGCCACTGGCGATCCTTACATGACCTTCTATAAGGCCAGCGCACGTCAGGGTTACATCCAGCATACCGACGGAACCAACGATGGTGCTGGCTTCAGGTTCTTCAACGACCTGACGGACGACTACCTGTACCTGCACAATGTGAATACCATTGACGCGCTACGGTTCTACGACGCGTCTACCGCGCTTCACAACGTAGTGTGGCACAGCGGCAACCAGCCGATTACCACTGCGAGCACAGGCAACACCCTTGCCAAGCGAGACAGTTCTGGCGACATTCACGCACGCCTTTTCCGTTCTGAGTACGACACTACGAACGGTACAGTTGGCTACATCATGACGCAGATCAATACGACGACGGATAACTACATTCGTCCGTCTACTCCTGCGCAGGTGGCTGCTGCACTTGGTCCGATCCTGACTGCGGACAAGGTAGAGACTAATGTCTCTGGCGAGTTCACGCCTGTATTGGCTGGCCTAATCACTTGGGCGCACGGTCTAGGCGCAAAGCCGACGATGATCGACTTGTTCATGATCTGCAAGACGGCAGAGCACGGTTGGGCGGTGAACGACGAGTTTGGGCCGATCGGTAACAACATTCAGTACTCCGATCGATGGGTGCATAGCCTAGTATGGGCAGACAGCACCAACGTCTACGTTCGCACTCAGAACACCAGCGGCGGAAACTACGTGTTCCCCGCCATCGTCAACCAAGACACTGGTCAGCCTGTCTACGCGACTGCTGCTAACTGGCGTCTGAAGATCAAGGTACGCAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a945f773d3d8a2ee4ba6a58048888268dded711b4fa4433d160d236ce5282058
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6677
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J. and Juarez,S. 2017-09-25 — GenBank