Protein

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Genbank accession
WGH49917.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MQFLLSPLMKGLVGGRVGGWHSPDHATVTRYTTTLNPAGGMYYSVPRTVIPANTDFEWGFELSPNAGLFHVFGDSTNADAPGSPLARRLAKNSDFEWLGSGFNSNGVVGSAWQSDGKLHKLIFRRVGSLVSILIDGVLDISANYTGEVSFDRIGGKYGGTTSLPTFSGSVFSSKLTVPSNTALNHDYRFDDNDGVLVDYSGNNANGASVNVTAADRELMTFDVTRNAWVGGELWIENSVVTTGGNPWIINGDGSYTRNPGAAFGQLFLNNPPIIGGAKYIVSFNVTQVTGVLRVLTRNASGVNAQGSALAVGFFEFKVTAENNFNGYIWFDTVSAGNSATINTVSLKLIIEVA
Physico‐chemical
properties
protein length:353 AA
molecular weight: 37618,52550 Da
isoelectric point:5,53233
aromaticity:0,11048
hydropathy:-0,01728

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGH49917.1
1 353
Domain Start End Length (AA) Confidence
N-terminal 1 21 21 0,9331
Central domain 22 220 200 0,3260
C-terminal 221 353 132 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-21
Central
22-220
C-terminal
221-353

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage vB_PtuP_Slicky01
[NCBI] 		3038240 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH49917.1 [NCBI]
Genbank nucleotide accession
OQ508958 [NCBI]
CDS location
range 7355 -> 8416
strand +
CDS
ATGCAGTTCTTACTATCCCCTTTGATGAAGGGGCTAGTGGGCGGTAGGGTTGGGGGATGGCACTCCCCTGATCATGCTACTGTCACTAGGTATACCACAACGCTCAATCCTGCGGGTGGGATGTATTACTCAGTGCCGAGGACTGTTATCCCTGCTAATACGGATTTTGAATGGGGATTTGAGTTATCACCTAATGCGGGACTCTTTCATGTGTTCGGTGATAGCACCAATGCAGATGCTCCAGGTTCACCGCTTGCTAGGCGGCTGGCTAAAAATAGCGATTTTGAATGGTTAGGTAGTGGATTTAATTCCAACGGAGTCGTTGGTAGTGCGTGGCAGAGTGATGGCAAGTTACACAAACTCATATTTAGACGGGTTGGGTCATTAGTTTCTATATTGATTGATGGCGTCCTGGATATAAGCGCAAACTACACGGGCGAAGTCAGCTTCGACAGAATTGGCGGCAAGTATGGTGGAACAACATCATTACCAACATTTAGCGGTTCAGTCTTTAGTTCAAAACTAACAGTGCCAAGTAACACAGCGCTTAATCATGATTATCGTTTTGATGACAATGATGGCGTATTAGTTGATTACAGCGGCAACAATGCAAACGGAGCTAGCGTAAATGTCACTGCTGCTGATAGAGAGTTAATGACGTTTGATGTGACTCGTAATGCTTGGGTTGGGGGTGAGTTGTGGATTGAGAATTCAGTTGTAACAACCGGTGGAAATCCTTGGATTATAAATGGGGATGGTAGCTACACAAGAAATCCAGGCGCAGCTTTTGGTCAATTATTCCTCAACAATCCACCGATAATTGGTGGAGCTAAGTACATAGTTTCGTTTAATGTGACACAGGTGACTGGTGTGCTTCGAGTTCTAACAAGAAACGCAAGCGGAGTTAATGCTCAAGGCTCAGCATTAGCGGTTGGATTTTTTGAATTTAAAGTTACCGCCGAGAATAACTTTAATGGGTATATTTGGTTCGATACTGTTAGCGCAGGAAACTCTGCGACTATCAATACAGTGTCTCTAAAACTAATCATCGAGGTAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b089aee2beb8f635136d19c059eeeeddc249ec1abcae49bd1288dca0d11a7aac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7195
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecogenomics reveals distinctive viral-bacterial communities in the surface microlayer of a natural surface slick Rahlff,J., Wietz,M., Giebel,H.-A., Bayfield,O., Nilsson,E., Bergstrom,K., Kieft,K., Anantharaman,K., Ribas-Ribas,M., Schweitzer,H.D., Wurl,O., Hoetzinger,M., Antson,A. and Holmfeldt,K. 2023 — GenBank