Protein

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Genbank accession
WJJ59710.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
QPDAIAMFSSLVSIDSATSQFPTNSVAATGSITWGLNCAADGNYTFAGGHTVTTDNTCNYSAAWGRGISLGPGAQYSASFGRENHITGNHQFATGRGHTTSSDGETCLGTFSFYASEQTNKVKLQVGVGSSSSVKKNAITAREDGAVEINVSSSHEPAQKGEMVIHAESNTSLRIKVRGTDGVVRSTVLTLA
Physico‐chemical
properties
protein length:192 AA
molecular weight: 19940,61520 Da
isoelectric point:6,30773
aromaticity:0,06771
hydropathy:-0,25781

Domains

Domains [InterPro]
DC_0394
RBD
1–192
DC_0394
IPR011049
STR
8–117
IPR011049
IPR011049
STR
25–167
IPR011049
WJJ59710.1
1 192
Architecture
STR
RBD
STR 1-167 | RBD 168-192
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ59710.1
1 192
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0027
Central domain 11 181 172 0,0801
C-terminal 182 192 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-181
C-terminal
182-192

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ST56
[NCBI] 		3027702 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ59710.1 [NCBI]
Genbank nucleotide accession
OQ860968.1 [NCBI]
CDS location
range 1 -> 579
strand +
CDS
CAGCCTGATGCAATTGCTATGTTTAGTTCTCTGGTAAGTATTGACTCAGCAACATCTCAGTTTCCAACCAATAGTGTAGCTGCTACTGGTTCCATTACTTGGGGGCTGAACTGTGCAGCAGATGGTAACTACACCTTCGCAGGCGGTCATACTGTAACAACGGATAATACATGTAACTACTCTGCTGCATGGGGTAGGGGCATCTCACTGGGACCCGGTGCTCAGTATAGTGCAAGTTTCGGTAGAGAGAACCACATAACTGGTAATCACCAGTTTGCAACTGGTCGAGGCCACACTACCAGCAGTGACGGTGAAACCTGTCTAGGCACTTTCTCTTTCTATGCGTCAGAGCAAACAAACAAGGTGAAGCTACAGGTTGGTGTTGGTTCTTCATCTTCTGTTAAGAAGAATGCCATCACAGCAAGGGAAGATGGTGCGGTAGAGATTAATGTATCATCTAGCCATGAGCCAGCACAAAAAGGTGAAATGGTAATCCATGCGGAATCTAATACTTCGTTACGCATCAAAGTTCGTGGTACTGATGGTGTAGTTAGGTCTACTGTTTTAACGCTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02fd60796a021b0e9d739e371e91b13ee52efb3dd86712c90596c492dcfb38af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7981
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50