Protein

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Genbank accession
WPH64042.1 [GenBank]
Protein name
putative tail fiber protein H
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSDVMRKIVNFPVGLRTTATAATDNDIPNKAQVLAFISGKLNAKDSVRAASESNVDIATGGLITIDGVALSDGDRVLLKDQADNTENGIYIASAGAWSRSADADENGELRPYTTVFARDGNTHAGHKYALQATNDIVIGTDAQVWVHEATLAGDASDITVDQTNLSNFSGATVQSALESVDDAFDTTNGNVTALDTRLDNLSGVTGSNLETFTGTTFTDNSDIKSVLQEAETAIESNAQIYANNGYESASTALTTGNAINFNHALGSRWLSNIEVYEAATGEKITSTVTITAVDANNLTVQNDDVDINVIVVARV
Physico‐chemical
properties
protein length:315 AA
molecular weight: 33130,68770 Da
isoelectric point:4,20406
aromaticity:0,05397
hydropathy:-0,17238

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpP_1
[NCBI] 		3092672 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPH64042.1 [NCBI]
Genbank nucleotide accession
OR734989 [NCBI]
CDS location
range 30667 -> 31614
strand +
CDS
ATGTCTGATGTAATGCGCAAGATAGTTAACTTTCCTGTAGGTCTACGCACAACAGCGACGGCGGCAACGGATAACGACATTCCTAACAAAGCTCAGGTATTGGCGTTCATTTCTGGCAAACTGAACGCTAAAGATTCCGTTCGCGCAGCCAGTGAATCAAACGTTGACATTGCAACGGGCGGTCTAATTACAATTGATGGTGTTGCGCTGTCTGATGGTGATCGCGTGTTGCTAAAAGATCAGGCCGATAACACGGAAAACGGTATTTATATTGCTTCCGCTGGTGCATGGTCGCGTTCTGCTGATGCCGATGAAAACGGAGAGTTGCGACCATATACCACAGTATTTGCCCGTGATGGTAACACCCACGCCGGGCACAAATACGCGCTACAGGCAACCAATGACATTGTTATCGGTACTGATGCGCAAGTTTGGGTTCATGAGGCCACGCTTGCGGGTGATGCTTCTGATATTACCGTTGATCAAACTAACCTATCCAACTTCTCAGGCGCTACCGTTCAAAGTGCACTTGAGAGTGTTGATGATGCGTTTGATACAACTAACGGCAACGTTACAGCGCTTGATACTCGCCTTGATAACCTTTCCGGCGTTACTGGTTCCAACTTGGAAACGTTCACCGGGACAACGTTCACTGATAACTCAGATATTAAATCTGTTCTTCAGGAAGCTGAAACGGCTATTGAATCTAACGCGCAAATCTACGCTAACAATGGTTATGAATCAGCATCAACGGCGCTAACAACAGGTAACGCGATTAACTTTAATCACGCCCTTGGTTCTCGCTGGCTGTCTAACATTGAAGTTTATGAAGCGGCTACGGGTGAGAAAATCACATCAACGGTTACAATTACCGCTGTTGACGCTAACAATCTAACAGTGCAAAACGATGATGTTGATATTAACGTTATTGTTGTTGCGCGAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8820d057370e31d33938d304e1e053fe3a12d027822ef2be80ca30ef47da2474
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, identification and host range expansion of a novel lytic Vibriophage vB_VpP_1 and its application of biocontrol against Vibrio parahaemolyticus in oyster Li,F., Zhang,D.F., Bai,W.T., Li,X.P. and Li,J.R. 2022-04-07 — GenBank