Protein

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Genbank accession
WNL63020.1 [GenBank]
Protein name
baseplate wedge subunit and tail pin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKQLIQMGNNVDDGRGDYLRVGAKKINENTEEVFGKLGDGSTVYPAGAWKTWDSLANGRQLAPSWGDSFSINTMSSDVVVSLPKGTAADYGKVIRLRDVWSSWASRNVIVEAATGDTVKGAKSQKLYRDLMDVELVYCSPGRWEYADNKLVSKITSSNIATVSKKDFVATEGQTDFLNIFGENSFNARTLEVYHKGNLLWHGEVFSDDSDYGSPGANPGEIVALDNKSIRLRQPCSAGDIVAIKTYTDDLAVYRSSYTSRTVMVADISSGQMHLEGEVVVADLSKKKLFDFFADFGFTESDGSFNPIATEVLINGTQLTKSGTAGLAGEGCSSDPTLNEGSCPVGDWGESGRDFSVVKDANGDYRVIKIDEPLETGDFLTVRWFNNDIGTTLSWDEIEERADERYLVSQPYNPVILKNKLVYTEPANPNPCTSVVDPIQETLSNIPDVNKLFDMLYPIGTVYENAHNQANPRDYMGFGTWVPFAEGRTTVGWSHDNDVHFGKYVGECGEMSAPGTEGGTVDVVLKKENVPVLQSTKKVLVADPTGSILVGQCQIDPGSDGPGYFKYSEEILDINTDSQTPIPVNNLQPYVTTAKWLRIQ
Physico‐chemical
properties
protein length:599 AA
molecular weight: 65596,30100 Da
isoelectric point:4,64445
aromaticity:0,09349
hydropathy:-0,36928

Domains

Domains [InterPro]
IPR036240
STR
1–232
IPR036240 IPR054430 IPR053827
DC_2238
STR
1–581
DC_2238
IPR008987
ATT
2–148
IPR008987 IPR056391
WNL63020.1
1 599
Architecture
ATT
STR
ATT
ATT 1-263 | STR 264-450 | ATT 451-598 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNL63020.1
1 599
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9188
Central domain 199 447 250 0,4578
C-terminal 448 599 151 0,9833
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-447
C-terminal
448-599

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Ci1
[NCBI] 		3074391 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter sp.
[NCBI] 		1896336 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNL63020.1 [NCBI]
Genbank nucleotide accession
OR515478 [NCBI]
CDS location
range 23933 -> 25732
strand -
CDS
ATGAAGCAACTTATTCAGATGGGTAATAACGTTGACGATGGTCGCGGTGATTACTTAAGAGTTGGCGCAAAAAAGATTAATGAGAACACCGAAGAGGTATTCGGCAAGCTGGGTGACGGTTCGACTGTATATCCAGCCGGTGCATGGAAAACATGGGATTCATTAGCAAATGGTCGTCAATTAGCCCCGTCATGGGGCGATTCTTTTAGCATTAACACGATGTCAAGTGATGTTGTTGTTAGTTTGCCTAAAGGAACTGCTGCGGATTACGGTAAAGTTATAAGACTGCGTGATGTATGGTCATCATGGGCTTCTCGCAACGTTATTGTTGAAGCTGCTACAGGCGACACGGTAAAAGGCGCTAAGAGTCAGAAACTTTATCGCGACTTAATGGACGTTGAGCTAGTTTATTGTTCTCCGGGTCGTTGGGAGTACGCCGATAATAAACTGGTGAGTAAAATCACTAGTTCTAATATTGCAACTGTTAGTAAAAAGGATTTTGTTGCTACAGAAGGTCAAACTGACTTCTTGAATATATTCGGCGAGAATAGTTTCAACGCGAGAACATTGGAAGTGTATCACAAAGGTAACTTGCTATGGCATGGTGAAGTATTCAGCGATGACAGCGATTACGGTTCTCCTGGTGCAAACCCCGGTGAAATTGTTGCACTTGATAACAAGAGCATTCGCCTGCGTCAACCTTGCAGCGCTGGTGACATCGTGGCGATCAAGACATACACCGATGACTTGGCAGTTTATCGTAGCTCCTATACGTCTAGAACTGTCATGGTTGCAGACATTAGTTCAGGTCAAATGCATCTTGAAGGTGAAGTTGTTGTAGCCGATTTGAGTAAAAAGAAATTATTTGATTTCTTTGCTGACTTCGGTTTCACCGAATCAGACGGTTCATTTAACCCGATTGCTACTGAGGTATTAATTAACGGTACTCAGTTGACAAAATCTGGCACTGCGGGTCTCGCTGGTGAAGGATGTTCTTCTGATCCTACATTGAATGAAGGATCATGTCCAGTCGGTGATTGGGGTGAATCAGGACGCGATTTCAGCGTTGTTAAGGACGCAAACGGTGATTATAGAGTAATTAAGATTGATGAACCGTTGGAGACAGGTGACTTTCTGACTGTTAGATGGTTTAATAACGATATCGGTACGACTCTGAGTTGGGACGAAATAGAAGAAAGAGCCGACGAGCGTTATTTGGTTTCTCAGCCTTATAACCCAGTTATTCTGAAAAATAAACTCGTTTATACGGAGCCCGCTAATCCTAATCCTTGTACTTCTGTTGTTGATCCGATTCAAGAGACATTGAGTAATATTCCTGATGTCAATAAACTTTTCGACATGTTATATCCAATCGGAACAGTTTATGAGAACGCACATAATCAGGCTAACCCTCGGGATTATATGGGCTTCGGTACTTGGGTTCCATTTGCAGAAGGAAGAACAACTGTAGGATGGTCTCATGATAACGATGTTCACTTCGGTAAATATGTCGGTGAATGTGGAGAAATGTCTGCACCGGGTACAGAAGGCGGAACAGTTGACGTTGTATTGAAAAAAGAAAACGTTCCTGTACTGCAATCAACTAAGAAGGTTTTAGTTGCAGACCCGACCGGAAGCATATTAGTAGGTCAATGTCAAATCGACCCCGGTTCTGATGGTCCTGGTTACTTTAAATACTCAGAAGAAATTTTGGATATTAACACGGATTCACAGACTCCAATTCCCGTTAATAATTTGCAACCGTATGTTACAACTGCAAAATGGTTAAGGATTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
41b73a722e3127e61c75c9c808dcc2ee302afb0940bac3951eb3a1041577e293
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6324
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50