Protein

View in Explore
Genbank accession
WYD67410.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGKGGGGSSHTPKEQKDTLESSQSISIIDIFSEGPIYGLKDGLKSVYLDNTPVLASDGTENYPSVSVSLNLGTEDQDYLDGFPQNASEISVGVQVKQSAPVIRTVTDDKVDMVRLNLYSSGLYVVTKDGDTKRTNLQMRVEMRGPGSNDWEVKARLDFIDQKSKGEFSFQAEIWDLPATPFDIRVVRETSDAVDGDWQAIQNLSYWRSYSLVINQKYRWPYTAYAGIKFDSDNFNGAIPSRKYLMRGRIVQVPVNYDPETRTYSGYWNLQFKAAYTNNPAWIIYDMIKNNVYGLGKFGINANEMMLYQAAQFCDTLVDNGRGEMVPRFVCNAYITEQRQAWDLITDFLSIFRAIPAYDGKQFFPVIDMPKDPVYLYNESNTVPDANGVHFNYSATGLTDRFSVVEVRYINKENFYEQDTIQVVDDEMVNRFGWNVKKVEAFGTDTKDQAQRFGLYILATEKFESKSVSFTVGQDGLRNLPGDIIEVYDPSYFGANIGGRILDISNDRMTITLDRKISIPVNAEVILTFINDDRVPVDYPVTPGSGDFDTFRLSTTCPNTLAVYSVYGIRINNKGRKLWRCVSVSENADSLQYSINAVEYYAEKTAYVDDGVYFAPEGETMYGNNIPAVNGLEVEYTPDSDRGTVRIYWNAPQTARNISYNVRVLRDGALVLNANTTDAFYFITPDAVGSYSVSVRGVGSDGKMGVESQAVFIMAVPPQPSSISWNSSNYTITLTPILSQLATLGEQYEWFIGANEDEVLAQNNNLGFAYRLNQVGLMPNTTYWFGVRSVNSLGRSAITTVEAKTKFDADEITGILEIALPKTDYIQGINTDIEGLSDLASLRVIDKNGDNPRITGVYMNAGDASQNIASVVDIVADAFAISSPDDLTRWVYFDSTSRNLVILGDIRARAGTLDNVTINESCVIKGKLSANNIEGDIYTRQVGILSNKAIHVGTGQVDTVFMKIAAAPDFDRILESNLQLSMACWERNYFYVEMSINNGASWTQLYYFDSGNDGGNVQWPINQITLPASGTTEIQLKVRTTTGRTADIYITSPDNTGVAGTPEYKGTASAYKKGKTIITSVG
Physico‐chemical
properties
protein length:1081 AA
molecular weight: 120096,90160 Da
isoelectric point:4,68850
aromaticity:0,10916
hydropathy:-0,28677

Domains

Domains [InterPro]
DC_0016
STR
1–760
DC_0016 DC_0175
IPR053171
Unmapped
3–812
IPR053171
IPR055385
ATT
87–214
IPR055385 IPR032876 IPR055383 IPR057587
IPR036116
STR
641–799
IPR036116
WYD67410.1
1 1081
Architecture
STR
ATT
STR
ATT
STR
ATT
RBD
STR 1-86 | ATT 87-214 | STR 215-334 | ATT 335-503 | STR 504-717 | ATT 718-814 | RBD 922-1078 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYD67410.1
1 1081
Domain Start End Length (AA) Confidence
N-terminal 1 508 508 0,9155
Central domain 509 933 426 0,0317
C-terminal 934 1081 147 0,9301
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-508
Central
509-933
C-terminal
934-1081

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KM5a1-KLB5
[NCBI] 		3120039 No lineage information
Host Klebsiella sp. M5a1
[NCBI] 		2759708 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYD67410.1 [NCBI]
Genbank nucleotide accession
PP202993.1 [NCBI]
CDS location
range 21398 -> 24643
strand +
CDS
ATGGGTAAAGGCGGCGGCGGTTCATCGCATACACCAAAAGAGCAAAAAGATACACTGGAATCAAGCCAGTCTATTTCTATTATTGACATATTTTCAGAGGGGCCGATTTACGGCCTGAAGGATGGTTTGAAATCTGTATATCTTGATAATACTCCGGTTTTAGCATCTGATGGAACTGAAAATTACCCTTCAGTTTCCGTTTCATTAAATCTTGGAACAGAAGACCAGGATTATTTAGACGGGTTTCCTCAAAACGCATCAGAAATATCTGTTGGGGTTCAGGTTAAGCAATCAGCGCCAGTTATAAGAACTGTAACAGACGATAAAGTAGATATGGTAAGGCTTAATCTTTATTCATCTGGTTTGTATGTTGTCACAAAAGACGGCGATACAAAAAGAACAAATTTACAGATGCGTGTTGAAATGCGCGGCCCTGGTTCTAATGATTGGGAGGTAAAGGCGCGATTAGATTTTATTGACCAAAAGTCAAAGGGAGAATTTTCATTCCAGGCTGAAATCTGGGATTTGCCAGCAACTCCATTCGATATAAGAGTTGTCCGTGAAACATCTGATGCTGTTGATGGTGACTGGCAAGCAATCCAAAACCTTTCTTACTGGCGTTCATATTCTTTGGTTATAAACCAGAAATACAGATGGCCTTACACGGCTTATGCTGGGATTAAATTTGATTCAGATAACTTTAACGGGGCGATTCCATCAAGAAAATACCTGATGCGTGGGCGCATTGTGCAAGTTCCTGTTAACTATGACCCCGAAACAAGAACATACTCAGGATACTGGAATTTACAGTTTAAAGCCGCATATACAAATAATCCGGCCTGGATTATTTACGATATGATTAAAAACAATGTTTACGGTTTGGGTAAGTTTGGAATAAATGCAAATGAAATGATGCTTTATCAGGCGGCGCAATTCTGTGATACGCTTGTTGATAATGGGCGCGGTGAAATGGTTCCTCGCTTTGTTTGCAATGCCTATATCACTGAGCAGCGGCAAGCATGGGATTTGATTACAGATTTTCTTTCAATATTCAGGGCCATCCCTGCATATGACGGAAAGCAATTTTTCCCTGTTATAGATATGCCTAAAGACCCTGTATATCTTTATAACGAGTCTAACACCGTTCCAGATGCAAACGGCGTACATTTTAATTATAGCGCAACAGGACTTACTGATAGATTTTCTGTTGTTGAAGTTAGATATATAAACAAAGAGAACTTTTACGAACAAGATACAATTCAAGTTGTTGATGATGAAATGGTAAACCGTTTCGGATGGAACGTAAAAAAAGTTGAGGCTTTCGGAACTGATACAAAAGACCAGGCGCAAAGATTTGGTTTATACATTTTAGCAACTGAAAAGTTTGAAAGTAAATCAGTTTCATTTACTGTTGGTCAAGATGGATTAAGAAATTTACCAGGTGATATTATAGAAGTTTACGACCCTTCATATTTTGGCGCTAATATCGGAGGAAGGATTTTAGATATATCCAATGACAGAATGACTATCACTCTTGACAGAAAAATATCTATTCCTGTTAATGCTGAAGTTATACTAACATTCATTAATGATGATAGGGTACCTGTTGATTATCCTGTAACTCCTGGTTCTGGTGATTTTGACACTTTCAGGCTTTCCACCACTTGCCCGAATACTCTTGCTGTTTATTCTGTTTATGGGATAAGAATAAATAACAAAGGGCGCAAGTTATGGCGTTGTGTGTCTGTTTCTGAAAATGCTGATTCACTTCAGTATTCAATAAATGCTGTTGAGTATTACGCAGAAAAAACAGCGTATGTTGATGATGGCGTTTACTTTGCGCCAGAAGGTGAAACAATGTATGGAAACAACATTCCAGCAGTAAACGGTCTTGAAGTTGAATACACTCCAGATTCAGACCGTGGAACTGTTCGCATCTATTGGAATGCTCCGCAAACTGCTAGAAACATTTCATACAATGTAAGGGTTTTGCGTGATGGTGCTTTAGTTTTAAACGCAAATACTACTGATGCATTTTACTTTATTACACCTGATGCTGTTGGTTCTTACTCTGTTTCTGTTCGTGGTGTTGGCTCAGATGGTAAAATGGGCGTTGAGTCTCAAGCTGTTTTTATCATGGCTGTACCTCCGCAACCATCATCAATTTCATGGAATTCATCAAACTACACTATTACACTAACACCAATTTTAAGCCAACTTGCAACGCTAGGTGAACAATATGAATGGTTTATTGGTGCTAATGAGGACGAGGTTTTAGCTCAAAACAACAATTTGGGATTTGCTTACAGATTAAACCAGGTTGGATTGATGCCAAATACAACTTATTGGTTTGGTGTACGCTCAGTTAACTCTTTGGGGCGCTCCGCAATAACAACAGTTGAAGCAAAAACAAAATTTGATGCTGATGAGATAACTGGAATTCTTGAGATTGCATTACCTAAAACAGATTACATTCAAGGAATAAATACAGATATTGAGGGGCTTTCTGATTTAGCTTCATTGAGGGTTATTGATAAAAATGGAGATAACCCTAGAATCACAGGCGTGTATATGAATGCTGGCGACGCATCGCAAAACATAGCCTCTGTTGTTGATATAGTTGCAGACGCTTTTGCAATTTCAAGCCCCGATGATTTAACAAGGTGGGTATATTTTGATAGTACATCAAGAAATCTTGTTATCCTGGGTGACATAAGAGCCAGGGCCGGGACGCTTGATAATGTAACAATTAATGAATCATGCGTAATCAAAGGCAAGCTATCAGCAAACAATATAGAAGGTGATATCTATACAAGACAGGTTGGGATTCTTTCCAACAAAGCTATACATGTCGGAACGGGGCAAGTTGACACGGTGTTCATGAAGATTGCAGCCGCTCCAGACTTTGACAGGATTTTAGAATCAAACCTTCAATTGTCTATGGCTTGTTGGGAGCGAAATTATTTTTACGTTGAAATGAGCATAAACAACGGAGCTAGTTGGACTCAACTATATTACTTTGATAGTGGAAACGATGGAGGAAATGTTCAATGGCCCATAAATCAAATCACACTCCCGGCATCTGGAACAACTGAGATACAACTAAAGGTAAGAACGACAACAGGAAGGACGGCTGATATCTACATTACAAGCCCTGATAACACTGGTGTTGCTGGCACTCCTGAGTACAAAGGAACAGCGAGCGCATACAAGAAAGGAAAAACCATCATAACCAGTGTTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
575f8bef6d2a3f1f411f675b2769229db32a03fa2183ce575a3f13195164139e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8006
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of 24 phages infecting the plant-growth-promoting rhizobacterium Klebsiella sp. M5a1 Gittrich,M.R., Sanderson,C.M. and Sullivan,M.B. 2025-02-21 — GenBank