Protein

View in Explore
Genbank accession
XLQ30504.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKTRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQSYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIVQVPRNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALASATLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSPWTDYARGMSSTDVNAITDVILDEILDSDAMKELQVSAQDSAAKLNDYANSIIQNALANDADVRKMTKENGKRKAEIAHTTVLIANESEARAAEITQLKAQIDEDITSQVTILNEAIATESETRATQINQLQTQFGEDMAAGFTQVNQAIANESEARANSEAALDAKIGQNSAALDQKLDSWANVNGVGSMYTMKLGLKYNGQEYNSGMALQLTAQGSNVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNYIAGQQGWMINKNGGSEFQNTTVRGTIYATDGVFKGTVQAESFIGDIAVAKRYDSMTLRRNQTVQRNGHYQNRGYGMTVVLSCTLVCETYGNGNSQLGYTVDVTFNIGGQQAVRRIYIDAGNIVYGTTAVELRFAADLAADNNNVSFFIKATGRDAVTDYTVTVDNITATAFRTNSNSFT
Physico‐chemical
properties
protein length:1266 AA
molecular weight: 139699,54920 Da
isoelectric point:4,74540
aromaticity:0,09479
hydropathy:-0,28009

Domains

Domains [InterPro]
DC_0014
STR
1–1266
DC_0014
IPR053171
Unmapped
3–874
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783
IPR036116
STR
627–715
IPR036116
IPR003961
STR
628–722
IPR003961
XLQ30504.1
1 1266
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ30504.1
1 1266
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,8672
Central domain 501 1002 503 0,0732
C-terminal 1003 1266 263 0,5554
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1002
C-terminal
1003-1266

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS_GH-K1
[NCBI] 		3384912 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ30504.1 [NCBI]
Genbank nucleotide accession
PQ641082.1 [NCBI]
CDS location
range 25223 -> 29023
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCAAGACGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATTAAGTTATTGCTGGCAGTTTCTGACGGTGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGAGGCGTTCCGGTTCAGAACGAAGACGGGAGTTATAACTATGAGGGCGTTATTGCAGAATTTCGCCCCGGCACGCAAACGCAGAGTTACATCCAGGGCTTCAGTGAATCAAGTGCTGAATTCCAGGTTGCACGCGACGTTACCTTTAACACGCCGTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAATGGCGATATGGTCGGTTCGGTCGTTGAGTACAAGATCGAAATGGCGGTTGACGGCGCGAGCTATCAAACCTACCTGACCGACAAAATCGACGGGAAGAATACGACTGGCGGTTACGATCGCAGCATCCGCGTCAACCTACCGCAAGACTTCACGTCGCAGGTGCTTATCCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTAGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATTGATGCAAAATTCCGCTACCCGTTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATTCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTGTCCAGGTTCCGCGCAACTACGACCCTGTTAACAGGACATACGCCGGGACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAACAACCCGGCTTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAGCGCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGGTGGCGCAATATTGTGATGAGCTTGTGCCGGATAATCGCGGCGGGATGGAACCGCGTTACCTGATGGATGTGGTTGTGCAGTCTCAGGTTGAGGCCTTCCAGTTGGTAAGGGATGTTTGTTCAGCCTTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGACAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGACGGCGTATTCGTGCGAACATTTCCGAGCGAAAAAACGATGTACACATCGTGCAACGTGATGTTCGACGACGAAGAAAACCAGTACGAGCAGGACGTTGAACCAGTGTTTAACCCTGACGCTGCCATGCGGTTCGGTCACAACCCAACAAGCATCACAGCGATCGGTTGCACCAGACGGACAGAAGCTAACCGCCGCGGGCGCTGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGTCTGGAAGGTATGATCCCTTCGTGCGGCGATGTTATTTACGTTGCAGATCCGCACTGGCAATCAGCCTTCAACCTGGTGTTGTCAGGTCGCATTATGGAAGTAACGGGAACGCAGGTTTTCCTAGCTTTTCGCTGCGACGCGAAGGCGGGCGATACGCTGATTCTGAACACTGACGACGGCAAGCCATTACGCCGAACCATTGCCAGCGTATCAGCAGACGGAAAAACCCTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAACTGGCGGCTGAACAGTACGTTGTTACAAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTTGCCATCACAGCTACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCGGATTCAATGGGCGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGGATGAGCGTCGAGACGATGGTGATCGGCTGGTCTGCCGTGCAGTACGCAAAACTTTACGAGGTGCAATGGCGTAAGGATGGCGGCAACTGGAACAACGTGCCGCGCACAGCGACAACGCAGGTCGACATTGAAGGGATTTATGCTGGCGAATACCAGGCGCGCGTAAGGTGCATTAGCGGCGGCAATATCGCATCTCCGTGGTCTGCTTTGGCTAGTGCGACGCTGACCGGGAAAGTTGGAGCGCCGAAAGGGCCAATTAACCTTTTCGCGTCGGATAATGAAATCTTTGGGATTCGCGTTAAGTGGGCCATGCCTGAAGGTGCAGAGGATACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACTCTGATTCCTTATCCGGCGGCTGAATACTGGCACTCAATTTTGCCCGCTGGCTATGTGAACTGGTACAAGGCGAGAAGTGTAGACAGGATCGGAAATGTTTCACCTTGGACTGATTACGCTCGCGGCATGTCATCTACTGACGTTAACGCCATCACGGATGTGATCCTGGATGAGATCCTCGACAGCGACGCGATGAAAGAACTTCAGGTGAGTGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCTAACAGCATCATTCAAAATGCGCTGGCGAATGACGCGGACGTTAGGAAAATGACGAAGGAGAACGGTAAGCGTAAGGCAGAGATCGCGCATACCACGGTGCTGATTGCCAACGAATCAGAAGCGAGGGCGGCTGAAATTACGCAGCTTAAAGCGCAGATTGATGAAGATATTACGTCGCAGGTTACTATCCTTAATGAAGCCATAGCGACGGAGAGCGAAACGAGAGCTACGCAAATTAACCAATTGCAAACTCAATTCGGCGAGGATATGGCCGCAGGGTTTACACAGGTTAATCAAGCCATTGCAAACGAGAGCGAGGCGAGAGCAAACTCAGAGGCGGCACTAGATGCCAAAATCGGGCAAAACTCCGCAGCGCTAGATCAGAAACTCGACTCGTGGGCAAACGTTAATGGCGTTGGTTCCATGTATACGATGAAGCTGGGCTTGAAGTACAACGGCCAGGAATATAATTCCGGGATGGCCCTACAGCTTACCGCGCAAGGGAGCAACGTTGTTTCGCAGGTGCTGTTCATTGCTGATAGATTTGCTATCATCCGTAATGCAGCATCCGGCGCGTACACGCTACCGTTTGTTGTGCAGAATGACCAGGTTTTCATGAATAACGCGCTTATTCAGGACGGTTCGATTACCAACGCGAAGATCGGTAACGTCATTCAGTCAAACAACTACATCGCCGGGCAGCAAGGGTGGATGATTAACAAGAATGGTGGTTCTGAATTCCAGAACACTACTGTTCGAGGGACTATCTACGCTACCGATGGCGTATTTAAAGGCACTGTACAGGCGGAATCGTTTATAGGAGATATCGCCGTAGCAAAACGCTATGACAGCATGACGCTACGCAGAAACCAGACTGTTCAGCGTAACGGGCACTACCAAAACAGGGGCTATGGAATGACCGTAGTTCTTTCCTGTACGTTGGTATGTGAGACTTACGGAAACGGAAACTCACAGCTTGGTTATACCGTTGATGTTACGTTTAATATCGGTGGTCAGCAGGCGGTACGCCGAATTTACATTGATGCTGGCAACATTGTTTATGGCACAACAGCGGTAGAACTTCGATTCGCTGCCGACCTTGCCGCTGACAACAACAATGTTAGCTTCTTCATCAAGGCTACCGGACGCGATGCCGTCACCGACTATACCGTTACTGTCGACAACATCACAGCAACCGCATTCCGCACAAACTCAAATAGCTTTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6ff1b9ad03f8950cbc6eea450b08896e303e00f78c55a3f0ab2bd5a57282ac1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7503
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic Analysis of Klebsiella pneumoniae Bacteriophage GH-K1 Cai,R. 2021-01-25 — GenBank