Protein

View in Explore
Genbank accession
WQZ52372.1 [GenBank]
Protein name
lytic tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPPITWRNIGTTVSPGSARSLTAGTTGVQSALASLGDIIKQQQEMAVANAGVQREANTQNYLDQVASADLSQLQDPDFVAGLAGQRDAMGMRLDRAATRDAILNRRQALQKDTVAQQAFADQQAEVDQRGIVDELRTLAAQGRGRDVDAILAERQLINEGEIRKELAGVQDNLMQRQYREAGEQRAQAAADRAAEAHQLSMTAGRENLAYQRDLRQDAARERNDNKLADSAVMEITNQFRESRETANALLRDIGKEQGLPTDDTGLPDVSRMDPDQEASYREAVQSSGLSANLSATNEKQALVKTLRESGASPSAIQRATKQLDIMQGMDALAPEDAVKAENQVTAVNAELDRIQKQMTRNYETEVARNPFIEPSKTPLEDVTKTVEKLGKAGMPESERRLVADTLVEWSTNGMTIDGGQKIVVPSQLIAAAAASTDADSWIRNDAKSYLKNLQSLLGNKGMEQMAKDADSVRSDFLKEMTKLENDKLGNAYRVINSAKAKKGVSINPNDTVDRLLKRNF
Physico‐chemical
properties
protein length:520 AA
molecular weight: 56850,79210 Da
isoelectric point:5,13872
aromaticity:0,03077
hydropathy:-0,64481

Domains

Domains [InterPro]
DC_0193
STR
1–520
DC_0193
Coil
Unmapped
337–357
Coil
WQZ52372.1
1 520
Architecture
STR
STR 1-520
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Ka3
[NCBI] 		3110778 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQZ52372.1 [NCBI]
Genbank nucleotide accession
PP056739.1 [NCBI]
CDS location
range 26162 -> 27724
strand -
CDS
ATGCCGCCTATCACTTGGCGTAACATTGGAACCACGGTAAGCCCCGGCAGTGCTCGTTCGCTGACTGCCGGGACTACTGGTGTCCAATCTGCATTGGCTTCGCTCGGCGATATCATCAAGCAACAGCAAGAGATGGCCGTGGCGAATGCTGGTGTACAGCGTGAAGCCAACACGCAAAACTACCTGGACCAGGTTGCTTCGGCTGACCTGAGCCAACTCCAAGATCCTGATTTCGTCGCTGGTTTGGCGGGGCAACGTGATGCCATGGGCATGCGTTTGGACCGTGCCGCAACCCGTGATGCGATCCTCAACCGCAGGCAAGCCCTGCAAAAGGACACTGTTGCTCAACAGGCATTCGCCGATCAGCAGGCTGAAGTAGATCAGCGGGGAATCGTAGATGAACTACGGACCCTGGCTGCTCAAGGCCGTGGCCGTGATGTAGATGCCATCCTGGCTGAACGTCAGTTGATCAACGAGGGCGAGATCCGTAAGGAACTGGCGGGTGTCCAAGACAACCTGATGCAACGTCAGTACCGGGAAGCCGGTGAACAACGTGCTCAGGCTGCTGCGGACCGTGCTGCTGAAGCTCACCAGTTGTCCATGACTGCTGGTCGGGAGAACTTGGCGTACCAGCGTGATCTGCGTCAGGACGCAGCACGCGAACGGAATGACAACAAGCTGGCCGACAGTGCAGTAATGGAGATCACCAACCAGTTCCGGGAAAGCCGGGAAACGGCCAATGCTCTGTTGCGGGATATCGGCAAAGAGCAGGGTCTTCCTACTGACGACACTGGTTTGCCGGATGTATCCCGTATGGATCCGGACCAAGAAGCCAGCTACCGAGAGGCAGTTCAGTCCTCTGGTTTGTCGGCCAACTTGTCGGCGACGAACGAGAAGCAAGCCTTGGTCAAGACCCTACGTGAGTCTGGTGCTTCGCCGTCTGCTATTCAGCGAGCCACGAAGCAACTGGACATCATGCAAGGCATGGATGCACTGGCACCTGAAGATGCTGTAAAGGCGGAGAACCAGGTGACTGCGGTCAATGCTGAGTTGGATCGAATCCAGAAGCAGATGACCCGCAACTACGAGACCGAGGTTGCTCGTAACCCGTTCATCGAACCGAGCAAGACTCCGCTGGAAGACGTTACGAAGACGGTGGAGAAACTGGGCAAAGCTGGTATGCCTGAATCGGAACGGCGTCTGGTTGCGGATACTCTGGTCGAATGGTCCACCAACGGTATGACTATCGATGGCGGTCAAAAGATCGTAGTTCCTTCCCAGTTGATCGCCGCTGCTGCTGCATCTACCGATGCCGATTCCTGGATCCGGAACGATGCGAAGAGTTACCTCAAGAACCTACAAAGTCTCTTGGGTAACAAGGGTATGGAGCAAATGGCCAAGGATGCAGATTCCGTGCGGTCGGACTTCCTCAAGGAGATGACCAAACTGGAAAATGACAAACTGGGTAATGCCTATAGAGTAATCAACTCGGCAAAGGCCAAAAAGGGTGTTAGTATCAACCCCAATGACACCGTTGATCGATTGCTCAAAAGGAATTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
003ab9d0709f7f9767faf61e9bfa5381dcce09f7067f4207e600e842460617b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7585
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50