Protein

View in Explore
Genbank accession
QKW95413.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,91
TF
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MTESLNSRVAKFDEIVTNVDTWVKGGSADTVDFGGGPVDSPAKLIEGQRTDIAAAAAALISQKDEQINQQANGVLAQANAAASNANGSAGAASASAASAAASAANSAASAADAAASSAQKFVTSAGAANQKPNTSYTYINPLSRVCTITGGGDGSNFQMIGYGHNRQKFLGAATTGVWNYLPVNGIANLNFYRIAGDGTRTKLTYTSGTPTGNQWSGAVGASSVTWTLGTALDTLSKLFVEDPFATIPTTGTQPDYSWIGGGYDNVVDRGVMQHVTGAHNRVLDGDHTTMLGGSYHTNDGGSYNAFCGGTDNWNGSGATLGSGHFGGLRNYCNGATSGTTFAQSCKVNSAYSWTHGYGNTANGTAVSIGGRNNTASGSDSAVFGNGNTSTANYSFAIGNGNTVGHHYARSLGGYKGRTLYQGELLVWAYRDTSVGTNPFVSRRQVPLSVVTSTTASALLATLDGITNLTMPVSTAWKCTLEVFARSTALRCAAFELKFRASTDSSGTLILGAPTVVWSDVDANFGTAANAASVSVVANGNAINCVVQPRVDSPVGAKWGAVLHINEVN
Physico‐chemical
properties
protein length:568 AA
molecular weight: 58183,18230 Da
isoelectric point:6,54503
aromaticity:0,08275
hydropathy:-0,13715

Domains

Domains [InterPro]
DC_0261
STR
1–317
DC_0261 IPR011049 DC_0296
IPR011049
STR
319–410
IPR011049
QKW95413.1
1 568
Architecture
STR
STR
RBD
STR 1-317 | STR 319-423 | RBD 433-568
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKW95413.1
1 568
Domain Start End Length (AA) Confidence
N-terminal 1 121 121 0,9793
Central domain 122 403 283 0,8730
C-terminal 404 568 164 0,9841
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-121
Central
122-403
C-terminal
404-568

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RPZH6
[NCBI] 		2736195 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKW95413.1 [NCBI]
Genbank nucleotide accession
MT361768 [NCBI]
CDS location
range 58663 -> 60369
strand -
CDS
GTGACCGAATCACTGAACAGCCGCGTCGCCAAGTTCGACGAGATCGTCACCAACGTTGACACGTGGGTGAAGGGCGGGAGCGCCGACACCGTTGATTTCGGTGGCGGCCCGGTCGATTCGCCCGCAAAGCTCATCGAGGGCCAGCGAACAGACATCGCTGCTGCTGCTGCGGCGCTGATCTCGCAGAAGGACGAGCAGATCAACCAGCAGGCGAACGGCGTGCTGGCGCAGGCGAACGCGGCGGCCAGCAATGCAAACGGCAGCGCTGGCGCGGCGTCGGCGAGCGCAGCGAGTGCGGCAGCGTCGGCGGCCAACAGCGCCGCGAGCGCGGCAGATGCCGCCGCATCGTCGGCTCAGAAGTTCGTGACGTCGGCTGGCGCGGCGAACCAGAAGCCGAACACGTCCTACACCTACATCAACCCGCTGTCGCGCGTGTGCACCATCACCGGCGGCGGAGACGGCTCGAACTTCCAGATGATCGGGTACGGCCACAACCGCCAGAAGTTTCTGGGCGCGGCCACCACTGGCGTCTGGAACTACCTGCCGGTCAACGGCATCGCCAACCTGAATTTCTACAGGATCGCGGGGGATGGCACTCGCACAAAGCTGACGTACACATCCGGCACTCCGACCGGGAATCAGTGGTCCGGCGCCGTGGGCGCCAGCAGCGTCACCTGGACGCTCGGCACGGCCCTGGACACGTTGAGCAAACTGTTCGTTGAAGACCCATTTGCCACGATCCCGACGACGGGCACGCAGCCTGACTACTCCTGGATCGGCGGCGGCTATGACAACGTGGTCGATAGGGGCGTGATGCAGCATGTCACGGGCGCGCACAATCGCGTGCTCGACGGCGACCACACCACGATGCTGGGCGGCAGCTACCACACCAACGACGGGGGCAGCTACAACGCATTCTGCGGCGGTACCGACAACTGGAACGGATCGGGCGCCACGCTGGGCAGCGGTCACTTCGGCGGGCTGCGAAACTATTGCAACGGCGCCACCTCTGGCACGACGTTCGCGCAGTCCTGCAAGGTGAACTCTGCGTACAGCTGGACGCACGGCTACGGGAATACTGCCAATGGCACCGCCGTCTCCATCGGCGGGCGAAACAACACCGCATCCGGGTCGGACTCGGCCGTCTTCGGCAACGGCAACACCAGCACCGCGAACTACTCGTTCGCCATCGGCAACGGCAACACGGTCGGCCATCACTACGCCCGCAGTCTGGGCGGGTACAAGGGCAGAACGCTGTATCAGGGTGAGCTGCTGGTCTGGGCGTACCGCGACACGTCGGTCGGCACGAACCCGTTCGTGAGCCGCCGGCAGGTCCCGCTGTCCGTCGTCACAAGCACCACCGCATCGGCACTGCTAGCCACGCTGGACGGCATCACCAACCTCACGATGCCCGTCAGCACCGCCTGGAAGTGCACGCTGGAGGTGTTCGCGCGCAGCACGGCCCTGCGGTGCGCCGCGTTCGAGCTGAAGTTTCGGGCCAGCACCGATTCATCAGGCACTCTGATCCTGGGCGCGCCGACCGTGGTCTGGTCCGACGTGGACGCGAATTTCGGCACGGCGGCCAACGCTGCCTCGGTCTCGGTCGTCGCCAACGGCAACGCCATCAACTGCGTGGTGCAGCCACGGGTCGATTCGCCTGTCGGCGCAAAGTGGGGCGCCGTGCTGCACATCAATGAGGTGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8120e1149bb33d1ee40f757e890bd3e98190e9b6406d0e58e1ab02394ef272a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of bacteriophage RPZH6 Lin,Z.J., Chen,C.J., Hu,F.P. and Cai,X.Q. 2022-02-17 — GenBank