Protein

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Genbank accession
XCP73870.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADEKKKVSELDLLSALTGQEFVEVVARNADGSFKNFRVLADKLRVGASAFDGAVKGGFTGTEEEWLKSLVGKSAYQTAVEQGYEGTEAQWSAATAPLFEILPEDKGMVLTVNEIGLPEWKILDLSFAKLDKVDNTADADKPISRQQKKELDRKIYTKDVPSAVMATLQQIGVVVSEDGKVVSFEEGRADAVAKLLLQHRRGSALEAAAHKGAEGTFFIDLEHKKLYLHDGVTLGGAQVGGLNADEVQAIIDAGIAVDKVTGLVDALAAKADLDENGKLKAEQLPDLEIPTKADEATVIEGLDDEGFATSKGVHALLAQIGFTKDDTGAWKLDPAVVA
Physico‐chemical
properties
protein length:338 AA
molecular weight: 36075,30380 Da
isoelectric point:4,71470
aromaticity:0,05917
hydropathy:-0,16183

Domains

Domains [InterPro]
DC_1725
STR
30–73
DC_1725 DC_0836
DC_1725
STR
71–98
DC_1725 G3DSA:2.10.10.30
XCP73870.1
1 338
Architecture
STR
STR
ATT
STR 30-98 | STR 129-194 | ATT 195-244 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HPP-Temi
[NCBI] 		3234043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCP73870.1 [NCBI]
Genbank nucleotide accession
PP968062.1 [NCBI]
CDS location
range 158505 -> 159521
strand -
CDS
ATGGCTGATGAAAAGAAAAAGGTTTCTGAACTCGACCTCCTGTCTGCACTAACTGGGCAGGAGTTCGTAGAGGTTGTTGCTCGCAATGCCGACGGTTCTTTCAAGAACTTCCGTGTACTTGCTGATAAGCTACGTGTAGGTGCTTCTGCTTTTGACGGCGCCGTCAAAGGTGGTTTCACTGGTACTGAAGAAGAGTGGTTGAAATCCCTTGTTGGTAAGTCAGCTTATCAAACTGCCGTAGAACAAGGTTACGAAGGTACCGAGGCCCAGTGGTCTGCTGCTACCGCTCCCCTGTTCGAAATCCTCCCTGAGGACAAAGGCATGGTTCTGACCGTAAACGAGATTGGTCTTCCTGAGTGGAAGATTCTGGATCTCTCGTTTGCGAAACTTGACAAGGTCGATAACACTGCCGACGCAGACAAACCGATCTCCCGTCAACAGAAGAAAGAACTGGATCGTAAGATTTACACCAAAGACGTTCCGAGCGCTGTAATGGCAACTCTGCAACAAATTGGTGTTGTTGTTTCTGAAGACGGTAAAGTAGTTTCGTTTGAAGAAGGTCGCGCTGATGCTGTGGCTAAACTACTCCTTCAACACCGTCGTGGTTCTGCTCTAGAAGCAGCTGCGCACAAAGGTGCTGAGGGTACGTTCTTCATTGACCTGGAACACAAGAAGCTCTATCTGCATGATGGCGTAACTCTGGGTGGTGCACAAGTTGGCGGTCTTAACGCCGATGAAGTTCAAGCCATCATTGACGCTGGTATTGCCGTTGATAAGGTTACTGGACTTGTTGATGCTCTCGCAGCTAAAGCCGATCTCGATGAGAACGGCAAGCTGAAAGCAGAACAACTCCCTGATCTGGAAATCCCGACTAAAGCTGATGAAGCTACTGTCATCGAAGGTCTCGATGACGAAGGCTTTGCTACCTCTAAGGGCGTCCATGCTCTCCTGGCACAAATTGGTTTCACTAAAGATGATACCGGTGCTTGGAAACTCGACCCAGCCGTAGTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9daf1a5aed1173d52ec083aa781ef3f68f0fd86a0b6bd85f9f36b5cceb8b65a5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7236
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Pseudomonas phage HPP-Temi Olorundare,O.O., Agu,C.G., Kabantiyok,D., Ogundeji,A., Dung,T., Zrelovs,N., Svanberga,K., Jansons,J., Kazaks,A., Morenikeji,R.O. and Pewan,B.S. 2024-10-25 — GenBank