Protein

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Genbank accession
QBX32385.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTFVYLIGAGKYVIFRDNKGVEITQLLNDISDIADIVVELDGTSVGSMIADIFRVDITKVDPFRDIKVGTAVYDPATGSHQTIYPVDGIYVNNADLIKVRITQPFTYEATLPVTRYQPPIAGKYGRAENTLPLMPRYKTGGTTTEPIYSISHIQVPRRIIEEIQVVRPVYNLTAITQSVADHFKNIISYFAGELPRNEGQAFAYKTAADTSAALARLSPPTPKQIFDTWDRFYADEYFAKGQGIPPFLSDGTTPHPAGRWYWDDTIKAAVMPDNTSSITGFLSDEEPEQYTLEVTCQSNNGDDDFLGVVLAFVKEGDQSHHLTLALSRSNSNGNGRGNEAQNIIYDLSMGTRQNIISVNTGDYSNQGWNGAFKRVKVIRTGDIFNISISKWGTTEYDPTLSMTVDLNSDPLLAKFKGPKKYGYMAFSQPQSYFKDIVYTGLPRNIVCDMGSNKVYSWNGTGWVLMQNTTPKTIYGAPRVIRSFEDPTQAWRIPVNGTPVPVQ
Physico‐chemical
properties
protein length:502 AA
molecular weight: 55830,25730 Da
isoelectric point:5,51886
aromaticity:0,10956
hydropathy:-0,30697

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX32385.1
1 502
Domain Start End Length (AA) Confidence
N-terminal 1 220 220 0,7950
Central domain 221 419 200 0,3570
C-terminal 420 502 82 0,6891
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-220
Central
221-419
C-terminal
420-502

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA1C
[NCBI] 		2562177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32385.1 [NCBI]
Genbank nucleotide accession
MK599315 [NCBI]
CDS location
range 205274 -> 206782
strand -
CDS
ATGACGTTTGTCTACTTGATCGGAGCAGGTAAGTACGTTATATTCCGAGATAACAAGGGAGTTGAAATTACACAACTACTCAATGACATTTCTGATATCGCTGATATCGTAGTTGAATTGGATGGCACAAGTGTTGGCTCCATGATAGCGGATATATTCCGTGTAGACATAACTAAAGTAGATCCATTTAGAGATATTAAAGTGGGTACTGCTGTTTACGATCCGGCAACCGGAAGTCATCAAACTATCTATCCTGTTGATGGTATCTACGTTAACAACGCGGATCTCATTAAGGTACGTATCACTCAACCATTCACTTATGAAGCAACTCTTCCTGTGACTCGGTATCAACCTCCGATCGCTGGTAAATATGGTCGTGCCGAGAATACACTTCCGTTAATGCCGCGATATAAGACGGGTGGTACTACCACTGAGCCAATCTACTCGATCTCTCATATCCAAGTTCCACGGAGAATTATTGAAGAGATCCAAGTTGTTCGACCTGTGTACAACCTTACTGCGATAACGCAGAGTGTAGCTGATCACTTCAAAAATATCATTAGTTACTTTGCTGGTGAGCTTCCTCGTAACGAAGGGCAAGCATTTGCCTATAAAACCGCTGCTGACACAAGTGCAGCTCTAGCTCGACTATCTCCACCGACACCTAAGCAAATCTTCGATACATGGGATCGTTTCTATGCTGATGAATATTTTGCTAAAGGTCAAGGTATCCCACCGTTCCTTTCCGATGGGACTACCCCTCATCCAGCGGGTCGTTGGTATTGGGACGATACGATCAAAGCTGCTGTAATGCCTGACAATACAAGTTCCATTACTGGTTTCCTTTCAGATGAAGAACCAGAACAATACACACTTGAAGTTACATGTCAATCTAACAATGGTGACGACGACTTCTTGGGTGTGGTTCTGGCGTTTGTTAAAGAGGGCGATCAAAGCCATCATTTGACACTCGCATTGTCTCGTAGTAACTCGAATGGAAATGGACGAGGTAATGAAGCACAGAACATCATCTACGATTTGAGTATGGGTACCAGACAGAATATCATTTCTGTTAATACTGGCGATTACTCTAATCAAGGTTGGAACGGTGCTTTCAAACGAGTTAAGGTTATTAGGACTGGTGATATATTTAACATCAGTATCTCCAAATGGGGAACGACCGAATATGATCCAACTCTGTCCATGACGGTTGACCTGAACAGTGATCCACTATTGGCTAAGTTTAAAGGTCCTAAGAAATACGGTTACATGGCCTTCTCGCAACCGCAATCGTATTTCAAAGACATCGTTTATACTGGACTTCCACGCAACATTGTTTGCGATATGGGTTCCAATAAAGTTTATTCTTGGAATGGTACCGGTTGGGTACTAATGCAGAATACAACACCTAAAACGATTTACGGTGCACCACGGGTAATCAGAAGTTTTGAGGACCCAACGCAAGCTTGGAGAATTCCAGTTAATGGAACTCCGGTACCTGTGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
67b8a19fcf4f6d7cc885124198904186785edf8f7d7c75acb8d810e5256d548c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4857
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy of healthcare-associated infections Kiseleva,I.A., Aleshkin,A.A., Rubalskii,E.O., Zulkarneev,E.R., Bochkareva,S.S. and Efimova,O.G. 2017 — GenBank