Protein

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Genbank accession
XDJ15410.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSEYGIELINTNGKNLVSSTDINYYLAASGYIQNSDRFRYGNGNNIISAVQFNTANFTAPLVFLRAIEQNSRCCSRPKYSTIQFTAASSLPTTNINYGQRVHAVYFWNTVTFTQPVEYFIFSRDRPASSGQYGIQSMDTSGQVIFDSSWYPLNLKSVHWYSAGTPYYADTQFDEKGPFAVGRKIATSLPLTRSAFHGTGQGWGDRSISRESSYIDPVTNKVYIGRVVTGFGVDGLPWAGAGGPWATGIMQDGPAPLLIADVTNYPIPYNPVALSAFGGTAGF
Physico‐chemical
properties
protein length:282 AA
molecular weight: 30863,02990 Da
isoelectric point:7,71347
aromaticity:0,14184
hydropathy:-0,20106

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDJ15410.1
1 282
Domain Start End Length (AA) Confidence
N-terminal 1 125 125 0,1107
Central domain 126 271 147 0,0013
C-terminal 272 282 10 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-125
Central
126-271
C-terminal
272-282

Taxonomy

  Name Taxonomy ID Lineage
Phage Brenneria phage vb_Bg_BREN6
[NCBI] 		3236918 No lineage information
Host Brenneria goodwinii
[NCBI] 		1109412 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ15410.1 [NCBI]
Genbank nucleotide accession
PQ031257 [NCBI]
CDS location
range 6869 -> 7717
strand +
CDS
ATGAGCGAATACGGAATAGAACTGATTAATACTAACGGTAAGAATTTAGTATCGTCGACGGATATAAATTATTATTTAGCCGCGTCCGGCTATATTCAAAATTCGGATAGATTTCGCTATGGAAACGGCAACAATATAATATCCGCAGTTCAATTTAACACTGCGAATTTTACAGCACCTCTTGTTTTTCTAAGGGCAATTGAGCAAAATTCGAGATGCTGCTCTCGACCAAAATATAGCACAATTCAATTTACAGCAGCCTCTTCCTTGCCAACGACTAATATAAACTACGGACAAAGAGTTCATGCTGTTTATTTTTGGAACACTGTAACTTTTACCCAACCTGTAGAATATTTTATTTTTTCAAGGGATCGCCCAGCATCTTCAGGGCAATACGGGATCCAATCTATGGATACTTCTGGACAAGTCATTTTTGATTCGTCGTGGTATCCTCTTAATTTGAAGTCTGTACATTGGTACTCGGCGGGAACCCCATATTACGCAGATACACAGTTCGACGAAAAAGGACCGTTTGCGGTCGGTAGAAAAATAGCTACAAGTCTACCACTCACAAGATCCGCGTTTCACGGTACAGGACAAGGATGGGGGGATCGTTCTATTTCACGCGAAAGTTCGTACATAGACCCGGTTACTAATAAAGTATATATTGGTCGAGTAGTCACCGGATTTGGAGTCGACGGCTTACCTTGGGCCGGGGCGGGTGGCCCCTGGGCCACTGGAATTATGCAGGATGGCCCTGCACCTTTACTCATTGCAGATGTAACAAATTATCCAATTCCATATAACCCTGTAGCTTTATCCGCATTTGGCGGAACGGCTGGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5ef9d153e6892110b021c0a00dd9f19b340a0efec957329f0e3b19546fb3e8a6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7147
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50