Protein

View in Explore
Genbank accession
QJT71370.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGSFKHLHEADNSLITEALNTAPYELQMVKKGTDVQFLFKDDEFQVRFRNAPKLGSNVRRVTIRQKQGNTYKDVLKGLGSDTNKVLSTVIAAVEAYAKTPMGKSTDGLVVDFSKKAIGRGAKLIQAVLKRNKTIKKYFTAVDAAVATDAAMVSHWLVGKGKDATEVFNGSDVVGLIGDGEISDTPPTPEFDPERPSTHLAIYEELKPKIEALGHSASAIMSGLMGGYYGTDINYEISIIEGRVKIGKRQAKIKDFSVEGLLQTFIILSEKYDRLNQGDPEIELKKAMDALGATKLRHGYKGQINGLTFIMSKKTNGVDVFKAEDGVESGTTVQLPTTSDSDLIIGAIEDASSAHKAKLNIESGNTLRGRYETYIEEEMGEDPVWKGSDKRIEFDFEDDDGDMLSVAITFSEDETEVEDITVGWDGDELYVKRNPRGDIDYVIKQALDIGYSAKETDEDLGDDSDREGLISAIADLEIDTGVSGWDDVDYAGFAMQATHIASGLVLTIFYTDDGEIGMNVKDPSSGEDVEDEVVDQDDVLDLMDDLGWDGEWDDEGADARIQQVRDGLSSRGWDVKAGDSDNELYIERKLITGMVAWIEFKDSGIVLNNGRVDGDQQLYAVARGETVQDKQLDNMSDVINIFVNKYEQTQASFDYSQNGAYSIKGTVESVVHYLLRNTRKGGLLDRSDVTNFDGRLVDERGQTVANVFKSTNPERGYSFIEVRVGGNSTGELEIVNGAVDMSEIGEWFDANVQRVLGESAKSKPSFASFLKEKQS
Physico‐chemical
properties
protein length:774 AA
molecular weight: 85122,65960 Da
isoelectric point:4,55504
aromaticity:0,07752
hydropathy:-0,44690

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VcorM_GR28A
[NCBI] 		2711163 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJT71370.1 [NCBI]
Genbank nucleotide accession
MT366762.1 [NCBI]
CDS location
range 48562 -> 50886
strand -
CDS
ATGGGTTCATTTAAACACCTACACGAGGCTGACAACAGCCTTATCACCGAGGCGCTGAACACGGCACCTTACGAATTACAAATGGTTAAGAAAGGCACGGATGTTCAGTTCCTGTTTAAGGACGATGAGTTCCAAGTACGTTTCCGTAACGCACCTAAACTAGGCTCGAATGTACGCCGTGTCACCATCCGTCAGAAGCAGGGTAACACCTACAAGGACGTGCTAAAAGGACTAGGTTCCGATACTAACAAAGTACTGTCCACAGTGATCGCAGCTGTCGAAGCCTATGCGAAAACCCCTATGGGTAAATCCACTGACGGCCTAGTAGTTGACTTCAGTAAGAAGGCTATCGGCCGTGGTGCCAAGCTGATTCAAGCGGTACTGAAACGCAACAAGACCATTAAGAAGTACTTCACGGCGGTTGACGCGGCGGTTGCAACGGATGCTGCTATGGTTAGTCACTGGTTGGTTGGCAAGGGCAAAGACGCTACTGAAGTCTTTAACGGCTCTGACGTTGTTGGTCTAATTGGTGATGGAGAAATCAGTGACACCCCACCTACTCCTGAATTTGACCCTGAACGCCCTAGCACACACTTGGCTATATATGAAGAACTCAAGCCTAAGATTGAAGCTCTGGGCCATAGTGCTTCGGCTATCATGAGTGGTCTAATGGGTGGCTACTACGGCACTGACATTAACTACGAAATCTCCATCATCGAAGGTCGCGTGAAAATTGGTAAACGACAGGCTAAGATCAAAGACTTCAGCGTAGAAGGTCTGCTGCAAACATTTATCATCTTGTCAGAGAAGTATGACCGCCTGAATCAGGGTGATCCAGAGATAGAACTGAAGAAAGCCATGGACGCTCTTGGTGCTACCAAACTGAGACACGGTTACAAAGGACAAATCAACGGCCTGACTTTCATCATGTCTAAGAAGACCAACGGTGTCGACGTATTCAAAGCAGAAGATGGTGTTGAGAGTGGAACAACGGTTCAGTTGCCTACGACATCCGACTCAGACTTAATCATCGGTGCCATCGAAGACGCTTCAAGTGCGCACAAAGCAAAGCTGAACATTGAATCCGGCAACACACTTCGTGGCCGATACGAAACCTACATTGAAGAAGAGATGGGTGAAGACCCTGTGTGGAAAGGTTCGGACAAGCGCATCGAGTTCGATTTTGAAGATGATGACGGTGACATGCTATCTGTTGCCATCACGTTCTCTGAGGATGAAACCGAAGTTGAAGACATCACGGTTGGATGGGATGGTGATGAGCTTTACGTCAAACGCAACCCGCGTGGTGACATCGATTATGTGATCAAGCAAGCACTCGACATTGGTTACTCAGCCAAAGAGACTGATGAAGACCTAGGTGATGACTCTGACCGTGAAGGCTTGATCTCAGCCATCGCTGACCTTGAGATCGACACTGGTGTGTCAGGTTGGGATGACGTGGACTACGCGGGCTTTGCAATGCAGGCGACCCATATCGCATCCGGTCTGGTCCTGACCATATTCTACACTGACGATGGTGAGATTGGCATGAACGTCAAGGACCCTTCATCAGGTGAAGATGTTGAAGATGAAGTTGTTGACCAAGATGACGTGTTGGACCTAATGGATGACCTAGGTTGGGACGGTGAATGGGATGATGAAGGCGCAGACGCTCGCATACAACAAGTTCGTGACGGTCTCAGCTCTCGTGGTTGGGATGTTAAAGCTGGTGACTCAGACAACGAACTTTACATTGAGCGCAAGCTGATCACAGGTATGGTAGCATGGATTGAATTCAAAGACTCAGGTATTGTTCTGAACAATGGTCGAGTCGATGGTGATCAGCAGTTATACGCCGTGGCCCGTGGTGAAACCGTTCAAGATAAACAATTGGATAACATGTCAGATGTGATCAACATATTCGTTAACAAGTATGAGCAGACACAAGCAAGCTTTGACTACTCACAAAACGGCGCGTATAGTATAAAAGGAACAGTAGAGTCGGTCGTGCACTACCTACTGAGAAACACCCGCAAAGGTGGTTTACTTGACCGAAGTGACGTAACCAACTTCGACGGAAGACTAGTCGATGAGCGTGGTCAAACGGTTGCTAACGTCTTTAAGAGCACAAATCCTGAGCGCGGTTACTCTTTCATTGAAGTGCGGGTTGGTGGTAACAGTACTGGTGAGCTGGAGATTGTCAATGGTGCCGTTGACATGTCTGAAATCGGTGAGTGGTTTGATGCCAACGTCCAACGTGTTCTAGGCGAATCAGCCAAGTCCAAGCCTTCATTTGCCAGCTTCTTGAAGGAAAAGCAATCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f54f20f516cb742b33d994c05c39f1f00f4871af7089f7e3236b4099006f702
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5471
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing of Vibrio coralliilyticus phages from Hawaiian seawater Richards,G.P. 2017-10-12 — GenBank