Protein

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Genbank accession
XCO38171.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKIYTENDKPTKAEIGLGNVTNDAQVKKAGDTMQGTLELQGSATELKLPFRIAMVRATEPYLVATRTDNNPVTNGFPSAETRTFVIHSKTASPTSDPNLGANLVDLICTQRPAGGGAYYIRAFGAPNTTTGAAGAIRAELQMLGDNGLVSLTGTQFNIGMQTVVSGTIFGAQMAIKGDGNKNLYFQDAGGNELSLIYADTGKNLYVRTGGGAYATRFASDGTLVLANHLTVPGQATFNGLGVFNNRASVDTDYDTQGANSAILRIVTNGDGNGVGDGVTHLGYKDSNGRYNHYFRGTGVTYINTKLGLNVNVPSYYNDVPQGTPAQYFLPTVGQGGKNYLRQFRGGNADTIWHETVQGGVYRLATGSTDAQEELQISTAGYARFRNEVQSNTSGAGGQFRAVQGNYGVILRNDGGNYYTLITNSGDPWGTWNGLRPFTISLTTGIVSMSSGVNISGGFNISGAAEFNNGLGCGTANGLGATGISLGDNDTGFKQEGDGILNAYANSQRIMRWTTGATANYKQLQVQGVNGPALLLNNTATNQSCYLLITLAGNNGAYFGFGGADDNVSVHNYRLNTTLQLRTSDLYMNRGLYVEGNVNANDVYIRSDIRLKSNLVELKDSLSKIEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDTDTGMLTISPSGINALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:737 AA
molecular weight: 78462,22140 Da
isoelectric point:5,66909
aromaticity:0,08277
hydropathy:-0,31031

Domains

Domains [InterPro]
DC_0466
STR
1–171
DC_0466 DC_1202
DC_0749
RBD
143–390
DC_0749 IPR048390 G3DSA:6.20.80.10 IPR051577 Coil
IPR030392
CHP
640–735
IPR030392
IPR030392
CHP
640–698
IPR030392
XCO38171.1
1 737
Architecture
STR
RBD
STR
ATT
STR
STR 1-171 | RBD 172-350 | STR 351-409 | ATT 410-473 | STR 474-737
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38171.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 464 464 0,1295
Central domain 465 663 200 0,1691
C-terminal 664 737 73 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-464
Central
465-663
C-terminal
664-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146015
[NCBI] 		3232196 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38171.1 [NCBI]
Genbank nucleotide accession
PP889466 [NCBI]
CDS location
range 46249 -> 48462
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTTGGCGGTAATACTATCTGGAGTCAGGCGAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAATCTACACCGAAAACGATAAGCCAACAAAGGCAGAAATCGGATTAGGCAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGTGATACAATGCAAGGAACTTTGGAATTACAAGGTTCTGCAACTGAATTGAAATTACCATTCAGGATCGCAATGGTTAGGGCAACAGAACCGTATCTCGTTGCAACTCGCACAGACAATAACCCAGTAACAAACGGGTTTCCTAGCGCAGAAACACGCACATTTGTTATACATTCAAAAACCGCGTCACCAACGTCAGATCCAAACTTGGGGGCAAACCTTGTTGATCTGATTTGTACCCAACGCCCTGCGGGTGGTGGTGCTTATTATATCCGTGCTTTTGGCGCACCAAACACGACAACTGGTGCTGCTGGGGCTATCCGTGCTGAATTACAAATGTTGGGTGATAATGGTCTTGTTAGTTTAACAGGGACGCAATTCAATATCGGGATGCAAACCGTTGTCAGTGGCACGATCTTTGGTGCGCAAATGGCTATCAAAGGCGACGGAAACAAAAACCTGTACTTCCAGGATGCTGGCGGTAATGAGCTTAGTTTGATCTATGCTGATACAGGAAAGAACTTATATGTTCGTACTGGTGGTGGTGCATACGCAACCAGATTTGCATCTGATGGAACTTTAGTTCTCGCTAACCATCTAACTGTTCCTGGACAGGCTACGTTTAACGGTCTGGGTGTATTCAATAACCGTGCTTCTGTTGATACTGATTATGATACACAAGGCGCAAACTCAGCAATATTACGAATAGTCACAAATGGTGATGGAAACGGGGTTGGTGATGGTGTTACCCACTTAGGCTATAAAGACAGCAACGGACGATATAACCATTATTTCCGTGGTACTGGTGTAACGTATATTAACACCAAATTAGGTCTTAACGTAAACGTTCCATCATATTATAATGACGTTCCACAGGGCACACCAGCGCAATATTTCTTACCTACTGTTGGACAGGGCGGGAAAAACTATTTGCGCCAGTTCCGAGGCGGTAACGCGGACACAATCTGGCATGAAACTGTTCAGGGTGGCGTATATCGACTGGCAACAGGTTCTACAGACGCACAGGAAGAATTACAGATTTCTACTGCGGGTTATGCCCGATTCCGTAACGAAGTCCAAAGTAACACTTCCGGTGCTGGCGGTCAGTTCCGTGCGGTACAAGGCAACTATGGGGTAATACTCCGAAATGATGGTGGTAACTACTATACCTTGATCACAAACTCTGGTGATCCGTGGGGAACATGGAACGGCTTACGCCCGTTCACTATTAGCTTAACTACTGGTATTGTATCAATGTCCAGCGGGGTTAATATCTCAGGCGGTTTCAACATTTCTGGTGCTGCTGAATTTAACAACGGACTTGGTTGTGGTACTGCAAACGGATTGGGCGCGACTGGTATTTCTCTGGGTGATAACGATACAGGTTTCAAACAGGAAGGTGACGGTATTCTCAACGCCTATGCAAATAGCCAGCGTATTATGCGATGGACTACTGGTGCAACTGCTAACTATAAACAGTTACAGGTTCAGGGTGTTAACGGGCCAGCATTACTTCTGAATAACACAGCGACTAACCAATCGTGTTATTTGCTGATTACTTTGGCAGGTAACAACGGCGCATACTTCGGGTTTGGTGGTGCTGATGATAACGTATCGGTACACAACTACCGACTGAATACAACCTTACAATTACGTACTTCGGATCTGTATATGAACCGTGGTCTGTATGTTGAAGGTAACGTAAACGCCAACGATGTGTATATTCGTTCCGATATTCGACTGAAATCTAATTTAGTTGAATTGAAAGATTCATTAAGCAAGATTGAACAGCTTAAAGGTTATATCTACGATAAGCAATCAAAAGATGCTGATGATATCGTATACCATCGCGAATCCGGTCTGATCGCTCAGGATGTTGAGAAGGTATTGCCGGAAGCAGTGCGCGAAGATACTGATACTGGTATGCTAACCATTTCACCTTCTGGGATCAACGCGCTTCTGGTTAACGCAATCAACGAACTGCGTGAACGTCTGGAAGCAATCGAAAACAAATTGGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a1ba0b33010db22492c0be2f8661451ea1d18f3284bd664a5b8d8f6df474295
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6364
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank