Protein

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Genbank accession
YP_008854222.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MVNSMFGGDLDPYEKSLNYEYPYHPSGNPKHIDVSEIDNLTLADYGWSPDAVKAYMFGIIVQNPDTGQPMGDEFYNHILERAVGKAERALDISILPDTQHEMRDYHETEFNSYMFVHAYRKPILQVENLQLQFNGRPIYKYPANWWKVEHLAGHVQLFPTALMQTGQSMSYDAVFNGYPQLAGVYPPSGATFAPQMIRLEYVSGMLPRKKAGRNKPWEMPPELEQLVIKYALKEIYQVWGNLIIGAGIANKTLEVDGITETIGTTQSAMYGGASAQILQINEDIKELLDGLRAYFGYNMIGL
Physico‐chemical
properties
protein length:302 AA
molecular weight: 34174,46120 Da
isoelectric point:5,09729
aromaticity:0,11921
hydropathy:-0,32980

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S25-3
[NCBI] 		1041526 Uroviricota > Caudoviricetes > Herelleviridae > Kayvirus > Kayvirus S253
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008854222.1 [NCBI]
Genbank nucleotide accession
NC_022920.1 [NCBI]
CDS location
range 51026 -> 51934
strand +
CDS
ATGGTTAACTCAATGTTTGGAGGGGACTTAGACCCTTATGAAAAATCATTAAACTATGAATATCCTTATCATCCTAGTGGTAATCCTAAACATATAGACGTAAGTGAGATAGATAATTTAACATTAGCTGATTATGGATGGTCACCGGATGCAGTTAAAGCATATATGTTCGGTATCATAGTTCAAAATCCTGATACAGGACAACCTATGGGTGATGAGTTTTATAACCATATATTAGAAAGAGCGGTAGGTAAAGCTGAAAGAGCATTAGATATATCTATACTACCTGACACTCAACATGAGATGAGAGATTATCATGAGACAGAGTTTAATAGTTATATGTTTGTACATGCTTATAGAAAACCTATATTACAGGTAGAGAACTTACAGCTACAGTTTAATGGTAGACCGATATATAAATACCCTGCTAACTGGTGGAAAGTAGAGCATCTAGCAGGACATGTTCAATTATTCCCTACAGCACTTATGCAAACAGGACAATCAATGTCATATGATGCGGTATTCAATGGATACCCTCAATTAGCAGGTGTATACCCACCATCAGGAGCAACATTTGCACCTCAAATGATACGATTAGAATATGTATCAGGTATGCTTCCACGTAAAAAAGCAGGAAGAAATAAACCTTGGGAAATGCCTCCTGAGTTAGAACAATTAGTTATAAAATATGCATTGAAAGAAATATACCAAGTATGGGGTAACTTAATCATTGGTGCCGGTATTGCTAATAAAACATTAGAAGTAGACGGTATTACAGAGACAATAGGTACTACTCAATCAGCTATGTATGGTGGAGCTAGTGCTCAGATACTTCAAATAAATGAAGATATAAAAGAACTATTAGATGGTTTAAGAGCTTACTTTGGATATAATATGATAGGATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
168a779b99469519abb113d7e7e1ce6fd1e6b4d1bec28bdc9e64a8e7de8eb0bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7287
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and phylogenetic traits of Staphylococcus phages S25-3 and S25-4 (family Myoviridae, genus Twort-like viruses) Takemura-Uchiyama,I., Uchiyama,J., Kato,S., Ujihara,T., Daibata,M. and Matsuzaki,S. 2014 — GenBank