Protein

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Genbank accession
AGH57086.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MGLKSTFSTNEGKAEACAVDKYVNTAYDNMVIISDNIEALLEISDNLEYLTVYLGSYTTDPTERPDGTPLQDGDYYFNTLINALVYYDLAETNWFTVDPQELLDARDAAQAAQAAAETAEANALVSENNAAASELNASNSEAAALASEQAAAISEANASASETAAALSETNAAASEANALASENAAKASETAAALSETNAATSETNAANSASAALTSETNAAASETSAANSAVVAGGYAADAEAAFDNFNDLYLGAKTADPTLDNDGNPLQVGATYWNSVTNDLRYWNGVSWDIPEETAIQAANTAVAARDDAQISETNAAASAAAASTSETNAATSEANALASEQAAALSETNAATSASNAATSEFNAAQSASDAAGSAASAAQSEANIDVAVTEAQNDIIGGSIFKGSNGEHVQNGDTVPSGTTHLRVEIGGEPTIVAMYPKSSGDVSSLSDDGATIGGTQVTFFKEIEKSVVYASNWIGLTTTNVTEKLIEMHKYAYENRLQVIYDGNFSLEVDLSKTSTSQGGTPIFVDSDTDFGGVTFSFKNASSVGGGDDDEFMRFDAQDLIDISGFVNISEFGYGSTYAPSLAAYEDAYIFINTTKDLVKRNPSDTEFRTYAVNNKVHRFGQLQYPVNYDCSDATGFKSAVLRPSKNAITIKGGIIDCTGVNNARLFVTARNNTTLDGIKCVRSDSPLNTSNNIFYFDRCCDITYKNMKPLGQNSSGTGTYGISGDGAVNLTLDNVSAVVGWGAMGTNYVNGLNVIGGYLSRVDVHFMGENIEVTRTQLKGLNIQVGIGGGYLKVKDVSVVLGKDPQRNIVDANRLIYIRPDYGSTWKGDIDIDGVSIRVAKEYDVVDTAFDMVQNVFSDNDTLVSPEIHYPFGMSLSAKNVSILVYPVGGFMGLELFNCGTVGPQQSRMMLPLKIEMESFKSITRNSEVPIVLSRTFSFIFDNDPQLHWAHTQSKSNYSGSDVEIFISDIDAIGTRPNGYISRDQQRNLLCFLSRSIDYDAHPNLPRFSVKGEKLSNLGFTWENQGDVDIDNSHIIGVWNNSNTTAIIKVTGSRCEVMKNPNGDNAYRRSFGICFENCIFIPSVGSLNDTLRTDNIVSASKCLVHKDVNLLTGAGMRTRQEMFDGFVDDPNGLVSLT
Physico‐chemical
properties
protein length:1145 AA
molecular weight: 121980,64540 Da
isoelectric point:4,36463
aromaticity:0,08210
hydropathy:-0,22035

Domains

Domains [InterPro]
DC_1362
ATT
4–180
DC_1362 DC_2319
Coil
Unmapped
102–122
Coil DC_2093
AGH57086.1
1 1145
Architecture
ATT
STR
STR
ATT 4-180 | STR 181-316 | STR 325-499 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH57086.1
1 1145
Domain Start End Length (AA) Confidence
N-terminal 1 488 488 0,9970
Central domain 489 1133 646 0,9703
C-terminal 1134 1145 11 0,6869
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-488
Central
489-1133
C-terminal
1134-1145

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VBP47
[NCBI] 		754073 Uroviricota > Caudoviricetes > Schitoviridae > Stoningtonvirus > Stoningtonvirus VBP47
Host Vibrio parahaemolyticus RIMD 2210633
[NCBI] 		223926 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
3722fa57d9c3a8fc5947375524a83881b2acfdfa97df1298cf86b27b08d346f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50