Protein

View in Explore
Genbank accession
QLF88466.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,69
TSP
Evidence RBPdetect2
Probability 0,87
Protein sequence
MTNARNKANIPVLNFSSTGIDDNADATAITIDSSENVGIKNTTPSNFNASARQLVVGSGSGDNGITIFAGTSNNSSLFLADGTTATNGYRGSVNYLHNGDALTLHANATETMRLTNGKVGIGVSSMTETLEVQSSVTTKVKAKTTTSSAIGGFEAWNNSSAYMKIYSYGSSASGSDFGGVANANIALFEGQGVSNVAFSTWGNAGGSNPDFIFAPQRSQKVIIKSDGKVGIGTASPSENLQVMDTSSNKPQIRIETSDGGNKRLDLYVDGSVGTIASDQSSQSLAFRTSNSERMRLTNTGLGIGTSAPTTRLDVDLSGTGETVPIVLANRNTTAGTGQKTTLGFGLSRNSGAFKSQAGTIEVGREQDWTNADANIDSYMAFSTYLNNAGTEKLRITSAGNVGIGTSSPSEKLEVNGTIKATAFDGAGRVLQVIQTVKTDAFTTTSTSMTDITGFSVSITPRSTSSKILVMVNVSMLSNNGGWGSLINLLRDSTNLTSSSIGGSADTYNAWNVGGGGGMSNNERKYNSPSISFLDSPSSTSSLTYKCQLQVNGGSTTAYFNRWGLNTDHAGVSTITVMEIQG
Physico‐chemical
properties
protein length:581 AA
molecular weight: 60311,58350 Da
isoelectric point:5,78856
aromaticity:0,06368
hydropathy:-0,27332

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF88466.1
1 581
Domain Start End Length (AA) Confidence
N-terminal 1 39 39 0,0021
Central domain 40 238 200 0,1043
C-terminal 239 581 342 0,9597
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-39
Central
40-238
C-terminal
239-581

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage Kolga EXVC016S
[NCBI] 		2736233 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp
[NCBI] 		2024849 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF88466.1 [NCBI]
Genbank nucleotide accession
MT375529.1 [NCBI]
CDS location
range 19700 -> 21445
strand +
CDS
ATGACTAACGCAAGAAATAAAGCAAACATACCAGTATTAAATTTTTCATCTACTGGTATAGATGATAATGCTGATGCTACTGCTATAACTATAGATAGTTCAGAAAATGTTGGGATTAAAAATACAACACCAAGTAATTTCAATGCTTCTGCTAGACAATTAGTTGTTGGAAGTGGCTCTGGCGATAATGGAATTACTATTTTTGCAGGAACATCAAACAATAGTTCTCTATTTCTAGCAGATGGAACTACTGCAACAAATGGTTATAGAGGTTCAGTAAATTATTTACACAATGGAGATGCTTTAACACTTCATGCAAACGCAACAGAAACTATGCGTCTTACAAATGGAAAAGTTGGTATCGGTGTTTCATCTATGACTGAAACATTAGAAGTTCAGAGTTCAGTAACTACTAAAGTAAAAGCAAAAACTACAACATCAAGTGCAATAGGTGGTTTTGAAGCATGGAATAATTCTAGTGCTTATATGAAAATATATTCTTATGGTTCTTCTGCTAGTGGAAGTGATTTTGGAGGAGTAGCAAACGCTAATATAGCTTTATTTGAAGGTCAAGGAGTTAGTAATGTAGCATTTTCGACATGGGGTAACGCAGGTGGTTCTAACCCAGACTTTATATTTGCTCCTCAAAGAAGCCAAAAAGTAATTATAAAATCAGACGGAAAAGTTGGTATCGGAACTGCATCGCCATCTGAAAATTTACAAGTAATGGATACATCATCTAACAAACCACAAATAAGAATAGAAACTTCTGATGGTGGAAATAAAAGATTAGATTTATATGTAGATGGTAGTGTAGGTACTATTGCATCAGACCAATCTTCTCAATCACTTGCTTTTAGAACTTCAAATTCAGAAAGAATGAGATTAACCAATACTGGTTTAGGTATCGGAACTTCAGCTCCTACAACTAGACTTGATGTAGATTTATCTGGTACTGGCGAAACAGTACCTATTGTACTTGCTAACAGAAATACAACAGCAGGAACTGGACAAAAAACTACACTTGGTTTTGGTCTATCAAGAAACTCTGGTGCATTTAAATCTCAAGCAGGAACAATAGAAGTTGGTAGAGAACAAGATTGGACTAATGCAGATGCTAATATTGATAGTTATATGGCTTTCAGTACATATCTTAATAATGCAGGCACAGAAAAACTTCGTATCACATCAGCAGGAAATGTAGGTATCGGAACTTCATCGCCTTCAGAAAAATTAGAAGTTAATGGAACAATAAAAGCAACTGCTTTTGATGGTGCAGGTAGAGTTTTACAAGTTATTCAAACTGTTAAAACAGATGCTTTTACAACTACCTCTACTTCAATGACTGATATAACAGGATTTTCAGTTTCAATAACACCTCGTTCTACTTCAAGTAAAATTTTAGTTATGGTAAATGTTTCAATGTTATCAAATAATGGTGGTTGGGGTTCTTTAATAAATTTATTAAGAGATAGCACAAATCTTACAAGTTCTTCAATAGGTGGCAGTGCTGATACATATAATGCTTGGAATGTAGGTGGTGGAGGTGGAATGAGTAATAATGAAAGAAAATATAACTCTCCTAGTATTTCATTTTTAGATTCTCCATCTAGTACTTCAAGTTTAACTTACAAATGTCAATTACAAGTAAATGGTGGAAGCACTACAGCTTATTTTAATAGATGGGGTTTAAATACTGACCATGCAGGGGTTTCTACAATAACAGTTATGGAGATACAAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0037e4194fb520c5c1abcb047cb594cfb249ffcdf4b268e56f95817880854e8b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7061
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50