Protein

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Genbank accession
BFM94379.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSGSQNALFASTNVTPATTYLRTDTTPWNFNPFVSDFTFEFYFYNLKQGNFGQAVFFTFGNHNDNGYALYATGRSQKLGLFYSVGQNDNHLTIVGATNSFNLNTKYHAAFVKQGNVFTIYQNGVANGSTTFNASAFSLNTKILTIGCISETANGATTEFPWIGNLDNFKMYSYAKYTSNFTPDP
Physico‐chemical
properties
protein length:184 AA
molecular weight: 20393,22820 Da
isoelectric point:6,81013
aromaticity:0,17935
hydropathy:-0,26576

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
17–181
G3DSA:2.60.120.200
IPR013320
STR
20–174
IPR013320
PF13385
LEC
20–174
PF13385
IPR013320
STR
30–174
IPR013320
BFM94379.1
1 184
Architecture
STR
STR 17-181 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage FLC4-4C
[NCBI] 		3157664 Viruses > unclassified bacterial viruses >
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFM94379.1 [NCBI]
Genbank nucleotide accession
LC819008.1 [NCBI]
CDS location
range 224370 -> 224924
strand -
CDS
TTGTCTGGATCCCAGAATGCATTGTTTGCATCGACAAACGTTACTCCGGCGACAACGTATCTTCGAACAGATACGACGCCTTGGAATTTTAATCCGTTCGTCAGTGATTTCACATTCGAATTCTATTTTTACAATCTGAAGCAAGGCAACTTTGGTCAAGCTGTCTTCTTCACGTTTGGAAATCACAACGATAACGGCTATGCCCTTTATGCAACTGGACGTTCCCAGAAGCTTGGGCTGTTTTATAGCGTCGGACAAAACGATAACCATTTGACCATCGTTGGTGCCACGAACAGTTTCAACCTGAATACCAAATACCATGCTGCGTTCGTTAAGCAGGGTAATGTCTTCACCATCTATCAGAATGGTGTTGCGAACGGAAGTACAACTTTCAATGCTTCCGCTTTTTCACTGAATACGAAGATACTGACCATCGGTTGTATTTCTGAAACAGCCAATGGCGCGACGACCGAGTTCCCGTGGATTGGAAACCTTGATAACTTCAAGATGTACAGTTACGCGAAATACACGTCGAATTTCACACCAGACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bddbdedda3bebe7f21e6c35417beb1a6e60a35d18472b08c742aa41a668e5216
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequences of novel Ralstonia jumbophages isolated from leaf litter compost Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2024-08-09 — GenBank